PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026398692.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 535aa    MW: 60890.1 Da    PI: 9.8904
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026398692.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B336.11.1e-111297195
                    EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3  1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
                    ffkv+    ++k++ l +p +f+ +++g    + + +l+++ g sW+vk+  r   ++   ++kGW +Fv+a+ L+ gDfv+ k++g+s f   vk
  XP_026398692.1 12 FFKVM--FGNFKKK-LKIPVNFIGKFKGM--IPYDSILRSPLG-SWNVKI--REEENGgLSFRKGWPDFVEAHYLDHGDFVTMKYIGDSLF--AVK 97
                    55666..4556665.99999999999554..456778888776.8*****..55444449***************************9887..554 PP
2B345.51.3e-142062841296
                     HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     k+ ++ +pkk ++++g     s  + l+d +gr W+v+l  +++ g++++ kGWkeF++ + L++g ++ ++++g+s+f  +v+v
  XP_026398692.1 206 KKYQMEIPKKVVTKIGRA--LSDIVALKDANGRLWNVEL--KRSEGKVWFYKGWKEFAEHHSLRDGYTLGISYNGNSQF--CVRV 284
                     667899*********854..8889***************..**********************************9999..6655 PP
3B349.57.9e-16433527199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ff v +++++l+++ l +pk+f ++h  +k+  k ++++++++++W++ +++r++  +  +++GW +  +  gL +gD++vF+l   +++e +v+
  XP_026398692.1 433 FFAVYMRASYLTNAYLHIPKSFSRKHL-PKTI-KNVMVRSSDNKVWTLGYCVRGYATQ--FSNGWTSLRRHLGLTAGDVIVFELLTGKDKEIRVS 523
                     889999********************4.4444.58***************77777655..89*********************987799999**9 PP

                     EE-S CS
              B3  96 vfrk 99 
                     v+r+
  XP_026398692.1 524 VIRE 527
                     9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 535 aa     Download sequence    
MGAQRDYSRP SFFKVMFGNF KKKLKIPVNF IGKFKGMIPY DSILRSPLGS WNVKIREEEN  60
GGLSFRKGWP DFVEAHYLDH GDFVTMKYIG DSLFAVKLYG LNGCEKVLPS TSSNGVKSIP  120
SRKRKEYGET SKGKFTDYGS EADHHKYHAS NSGRDSFCSD KRNGGLFKCD APKRKSTVNE  180
GRTRVDQAEC SRKGKPYFLV IWTENKKYQM EIPKKVVTKI GRALSDIVAL KDANGRLWNV  240
ELKRSEGKVW FYKGWKEFAE HHSLRDGYTL GISYNGNSQF CVRVTNFMEH LEDSGNQGES  300
NPKKRCRLSK REDDDDVIWE DTPPSRTHVE SMTNEEKPPL SVPASLDPMQ LNKDKGKKSV  360
VSDETSSPCL GNERTPSGER PPTLPVVKEE ESEETSDSPD APKLFHKSSR RAEGNERVAE  420
VTKLFKSQTQ YPFFAVYMRA SYLTNAYLHI PKSFSRKHLP KTIKNVMVRS SDNKVWTLGY  480
CVRGYATQFS NGWTSLRRHL GLTAGDVIVF ELLTGKDKEI RVSVIREIDN VLTKI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-30B3 family protein