PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026398704.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 279aa    MW: 32148.9 Da    PI: 6.9578
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026398704.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.45.3e-1822111198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ff+v+ ++d ++++ l lp  f+++ +  +  +k+ tl+d++ + W+vk+   k+++ y++++GW++Fv+   L+ g f++F ++g+s+f  +v+
  XP_026398704.1  22 FFQVF-TPDKSSHH-LKLPAAFINKLD--EDLPKKGTLRDSTDKLWSVKV--VKSGNDYFFQNGWEDFVNHYTLQYGNFLMFNYHGNSRF--HVS 108
                     66666.66777777.********7765..5588999**************..**********************************9999..999 PP

                     EE- CS
              B3  96 vfr 98 
                     vf+
  XP_026398704.1 109 VFD 111
                     997 PP
2B341.23e-131882601589
                     -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                      + +pk+ + +h ++   ++++t++ +sg++W v++ ++ + +ry++ +GW +F  +n++k g+ +++++++ ++
  XP_026398704.1 188 AVHIPKQLVIDHALE--LKTDMTIRVQSGKKWPVEVYFEESAKRYIICRGWHDFKTDNNMKHGEKCILEFKKGRG 260
                     478*********877..66789999999********99*******************************885533 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MGKYGKDIAS SSSVNGQKNH HFFQVFTPDK SSHHLKLPAA FINKLDEDLP KKGTLRDSTD  60
KLWSVKVVKS GNDYFFQNGW EDFVNHYTLQ YGNFLMFNYH GNSRFHVSVF DYTTQCERED  120
TTIDYVIGNG NPSLGEDACE LEVPESLRKS LGDSSENSSE NYEVIANSYD DPEKPRFTTT  180
VNERSPYAVH IPKQLVIDHA LELKTDMTIR VQSGKKWPVE VYFEESAKRY IICRGWHDFK  240
TDNNMKHGEK CILEFKKGRG GRRTSDVIHA YPLNVKLER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.18e-22B3 family protein