PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026398814.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB_related
Protein Properties Length: 302aa    MW: 34473.2 Da    PI: 6.3403
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026398814.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.94.2e-07244288345
                      SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 
                      +WT  Ed  l++a k ++++   +W++Ia  ++ g++   c  r  
   XP_026398814.1 244 NWTSAEDVALLNALKAFPKDvamRWEKIAVAVP-GKSKAVCMKRAK 288
                      8********************************.***999998865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MEFLDEESRP SRFMFQSKAS TETEPENFKV NKTLAVSCII ISVILIITSI FVFESETLKF  60
IVFWFSLSLI VGPFAPNSIT AGDIRVGQGQ ILEPLNEEDE ADQTGDKRRG FNRKQHQTVK  120
KNDDLRDVNA KSSEKLKMNT NNTTDVVYEE KEWVEEDFEM LKKQILKHPV GEPKRWELIT  180
EAFQGRHGLE SVIKMGKSLS ERKVGNGDSF SQFLKQRKPL DKRLVEESNG DFELINDDRK  240
ENSNWTSAED VALLNALKAF PKDVAMRWEK IAVAVPGKSK AVCMKRAKEL KNDFRSSKTS  300
GD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45420.15e-76MYB_related family protein