PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026398967.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB_related
Protein Properties Length: 282aa    MW: 31223.5 Da    PI: 9.8893
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026398967.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.31.5e-12555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT+eE+e l+ +v+++G+g Wk I +          R+  ++k++w++
   XP_026398967.1  5 KQKWTAEEEEALKAGVNKHGTGKWKNIQKDPEythilAARSNIDLKDKWRN 55
                     79***********************************99**********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MGAPKQKWTA EEEEALKAGV NKHGTGKWKN IQKDPEYTHI LAARSNIDLK DKWRNMSVSA  60
TGEGSRPKGV KAAAAVAATT PKVPKTQSAI AIFQSSSSSQ TTEEAKDKVL VDHTKNTTDG  120
KPPPRYNAMI LEALSNIKDP NGADIGAIDD FIERRHEVPS NFRRLLSSKL RRLVAQDKLE  180
KVQNYYKIKK DATFGTRSHP KAKESQAKKS PDCRFPGSTI MESSIFTAQK IAEAENKSFV  240
ASEAVKEAER VEGMAEHSAC MKQFFEDILE QCKRGEPVIM AF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17520.13e-55MYB_related family protein