PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026399029.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 203aa MW: 23280.2 Da PI: 6.361

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026399029.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	51.6	3.1e-16	57	146	5	90
FAR1 5 eYAkevGFsvrkskskkskr.ngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 eY ++ GFsvr+++++k++ +e+t+ +vC +egk+++e++ +k+ r+ ++ +++Ckak++ ++ ++kw vt ++ eHnH+++ XP_026399029.1 57 EYRRRNGFSVRVQSTNKTRVgVDEVTSVYMVCAREGKKKKEQNIegIDKKGRSCNTIKCECKAKIRFIFDEeRSKWIVTIFSDEHNHKFV 146 7999********9999651578************99886666777788889999999999877777*************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 203 aa Download sequence
MDEPPNTFTC GDDQVQSDET EAMNHSSNGK NDVSNLEIPY EGMHFNTHEE AQENCTEYRR 60 RNGFSVRVQS TNKTRVGVDE VTSVYMVCAR EGKKKKEQNI EGIDKKGRSC NTIKCECKAK 120 IRFIFDEERS KWIVTIFSDE HNHKFVSPSK RKRMRINRCM PDDAKDLTEA FNRENIQISK 180 VPSIFGGADI GLVEEIIGII YAM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	93	120	KKKKEQNIEGIDKKGRSCNTIKCECKAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	4e-15	FAR1 family protein