PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026399518.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 599aa    MW: 68517.9 Da    PI: 6.5253
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026399518.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS376.63e-1152265971374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++cA+a++++d   a+++L+r++ ++sp gd  qRla++f+ +L+arla+++s++y++l  ++ts    s+ l+ ++lf  + P+ k s 
  XP_026399518.1 226 LRKLLIRCAQAIAADDRMTASEMLKRIRLHSSPLGDGSQRLAHCFADGLEARLAGTGSQIYSILLHKKTS---ASDFLKGQHLFMAAIPFKKAST 317
                     689*************************************************************999998...89******************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + aNq+I + +e+++ +Hi+Df+i +G+QWp L+q L++R++gpp+lRiTg++ p++g   +++++etg+rL+++Aee+ vpfe+++ +a+++e+
  XP_026399518.1 318 FFANQTINDVAENASILHIVDFGILYGFQWPGLIQRLSKRKGGPPKLRITGIDFPQPGfrPADRVQETGRRLRDYAEEFSVPFEYHA-IAQKWET 411
                     *********************************************************9*****************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++le+L++ ++E+l+Vn+v+q  +llde+v ++s+r++vL+lv++++P+v+v+   +  ++s+ F++rf eal  +s++fd le+++pre+  ri
  XP_026399518.1 412 IQLEDLKIYKDEVLVVNCVYQARKLLDETVISDSPRSAVLNLVRKMNPNVFVHGVTNGAYSSPYFVTRFREALFRFSSMFDLLETNVPREHPGRI 506
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      +Er llg+++ nv+aceg+er+er et+++W+ r  +aGF ++pl++++ ++ak  ++ ++ + + v+e+s++++lgWk+r ++++S+Wr
  XP_026399518.1 507 IIERDLLGKAAFNVIACEGSERVERPETYKQWHLRTVRAGFMQLPLNKDILNKAKDNVKLFYHKDFVVDEDSQWMLLGWKGRVIFALSSWR 597
                     **************************************************************889*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 599 aa     Download sequence    
MDQNPIFSSS IATLNVSQEE DTTSSEEYDF SDVVLNYINQ MLMEEDFEKK NSMFQESSAL  60
QAAEKPFYEI LGEKYPPPPD YNPLLHDVHL ESEPIWSFRK GVEEANKFLP DDNNLIVNLE  120
RNEERKISMT GSRGKKNVHR EDIEVEEGRR SNKQMAVFSE EAVQKAMFDM VLLGDEGECD  180
SANSTLRESL KIEASKNLKQ NGQTTGHYAD KFRGKKQNSE MDVVDLRKLL IRCAQAIAAD  240
DRMTASEMLK RIRLHSSPLG DGSQRLAHCF ADGLEARLAG TGSQIYSILL HKKTSASDFL  300
KGQHLFMAAI PFKKASTFFA NQTINDVAEN ASILHIVDFG ILYGFQWPGL IQRLSKRKGG  360
PPKLRITGID FPQPGFRPAD RVQETGRRLR DYAEEFSVPF EYHAIAQKWE TIQLEDLKIY  420
KDEVLVVNCV YQARKLLDET VISDSPRSAV LNLVRKMNPN VFVHGVTNGA YSSPYFVTRF  480
REALFRFSSM FDLLETNVPR EHPGRIIIER DLLGKAAFNV IACEGSERVE RPETYKQWHL  540
RTVRAGFMQL PLNKDILNKA KDNVKLFYHK DFVVDEDSQW MLLGWKGRVI FALSSWRPM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein