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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | XP_026399848.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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| Family | ERF | ||||||||
| Protein Properties | Length: 153aa MW: 17344.3 Da PI: 6.7768 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 56.9 | 5.2e-18 | 6 | 50 | 2 | 50 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaar 50
+++GVr+++ +g+Wv+eIr+p +r++lg+f tae+Aa+a+++a+
XP_026399848.1 6 KFRGVRQRH-WGSWVSEIRHP-----ImkTRIWLGTFETAEDAARAYDEAA 50
89******9.**********7.....447********************97 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 153 aa Download sequence |
MAKSQKFRGV RQRHWGSWVS EIRHPIMKTR IWLGTFETAE DAARAYDEAA WLMCGSRART 60 NFPYNPNEFR NARVLSPTLT AKLQRCCMGS SAQERLPKPE TVDETMEKHD NGSMDDEYIQ 120 EMINELIYYG SVEISSAPSQ SSSSSSSSSS FST |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G25190.1 | 3e-38 | ERF family protein | ||||




