PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026399876.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HD-ZIP
Protein Properties Length: 248aa    MW: 28575.2 Da    PI: 9.7475
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026399876.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.93.5e-18102156256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +k+ ++tkeq + Le+ F+++++++  +++eLA++l+L  rqV vWFqNrRa+ k
  XP_026399876.1 102 KKKLRLTKEQANLLETSFKQHNTLNMMQKQELAERLDLRPRQVEVWFQNRRARTK 156
                     678899***********************************************98 PP
2HD-ZIP_I/II111.84.4e-36102190189
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 
                     +kk+rl+keq++lLE+sF+++++L+  +K+ela++L+l+prqv+vWFqnrRARtk+k++E+d+e+Lk+++++l+een++L+ke +eLr+
  XP_026399876.1 102 KKKLRLTKEQANLLETSFKQHNTLNMMQKQELAERLDLRPRQVEVWFQNRRARTKLKKTEVDCEVLKKCVERLNEENRKLKKERQELRS 190
                     59*************************************************************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MGGDGEEETC DIGLSLRLGS GGFTSRSTNE IKHKTSRVQL SLLFPSNPKE EIGDDYHGKN  60
DGDRWSSKTE NQNHQEEHAK IVKKDNPSVD SNIDKYDHTS TKKKLRLTKE QANLLETSFK  120
QHNTLNMMQK QELAERLDLR PRQVEVWFQN RRARTKLKKT EVDCEVLKKC VERLNEENRK  180
LKKERQELRS TKLGPPSSSP FYPHHMPKND VALTMCRNCN KVSNKSSSEN KHNILTLFND  240
IGKANCKI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1101107TKKKLRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37790.13e-44HD-ZIP family protein