PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026400654.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MIKC_MADS

Protein Properties

Length: 227aa MW: 25671.2 Da PI: 8.8691

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026400654.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	88.6	3.4e-28	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr g++KKAeELS+LCda+va+++fsstgkl+eyss XP_026400654.1 9 KKIDNATARQVTFSKRRRGLFKKAEELSILCDADVALLVFSSTGKLFEYSS 59 68***********************************************96 PP
2	K-box	56	1.7e-19	83	173	10	100
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++ + + + + a+L+k i + +r +R++ Ge+L+ L+++eLqqLe+ Le +l+++ ++K e ++++i+ lq+k el een++Lr++++e XP_026400654.1 83 ASLELQLENSNCARLQKDIAEQRRRLRQMRGEELHGLNIEELQQLEKTLEAGLSRVLETKGERIMKEISSLQRKGMELLEENERLRQQMAE 173 555667778899****************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence
MAREKIQIKK IDNATARQVT FSKRRRGLFK KAEELSILCD ADVALLVFSS TGKLFEYSSS 60 SMKGIIERRD LHSKNLQKPN QPASLELQLE NSNCARLQKD IAEQRRRLRQ MRGEELHGLN 120 IEELQQLEKT LEAGLSRVLE TKGERIMKEI SSLQRKGMEL LEENERLRQQ MAEISRGNQR 180 STVLINSDKE GGQSSESVTN ICSSISGPPL EDDSSDTSLK LGLPFPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22540.1	2e-94	MIKC_MADS family protein