PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026400906.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 686aa    MW: 78194.1 Da    PI: 6.5627
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026400906.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS375.56.5e-1153146842374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                      +lL++cAeav++g+++ a++ L++l++++sp+gd+ qRla+yf+ +L+arla+s+s++y++l+ +  s   + e l+a++lf  + P+l++s++
  XP_026400906.1 314 DTLLIQCAEAVAAGNHRTASEHLNQLRQHSSPYGDASQRLAHYFADGLEARLAGSGSQIYSTLQHEMPS---VPEMLKAYQLFMVALPFLTISNF 405
                     679************************************************************999998...9********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                      aNq+I   +e+   +HiiDf+i +G+QWp+L++ L++R++gpp+lRiTg++ p +g   +e++eetg+rL+++A+el+vpfe++  +a+++e++
  XP_026400906.1 406 FANQTIGYLAESVASLHIIDFGILYGFQWPCLIRCLSKRKGGPPKLRITGIELPLPGlrPAERVEETGRRLRDYAKELNVPFEYHG-IAQKWETI 499
                     ******************************************************99999***************************.7******* PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     +le+L++++gE l+ n++ q ++l+desv ++s+rd+vLkl+++++P+++++   +  +ns+ F  rf +al ++s++fd le+ +pres+eri+
  XP_026400906.1 500 QLEDLKINKGELLIANCINQGKNLPDESVIMDSARDSVLKLIRKMNPNIFIHGVVNGTYNSPFFISRFRDALFHFSSIFDVLETVVPRESSERIN 594
                     *********************************************************************************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +Er l+g+e+ n++aceg+er+er et+++W++r  +aGF ++pl+++++k+ak    + + + + ++e+s +l+lgWk++ +++vS+Wr
  XP_026400906.1 595 IERYLFGKEAFNIIACEGSERIERPETYKQWQSRNIKAGFMQLPLNTHIMKKAKEQAITDYHKDFVIDEDSRWLLLGWKGKIMFAVSSWR 684
                     *****************************************************98776666567*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 686 aa     Download sequence    
MDQTHHRFNT SGNSSGSSST DTSSSSNVSQ EEEFDFSDAV LNYISQMLME ENNEDKIFMS  60
QKDYLALQSA EKPFYDILGQ KYPIDCNPVD QIENFTHYNG SENAVETSWI GGLNAYESLF  120
NTENVPSHFT IRGEATPRLS YNNPPNNFIS VVEGLGESGV GKVQVPDVHS ESEPIWQFRK  180
GVEEANKFLP DDNNLIINLE RNRFSYGRRN KEASEARDSV VHLEKDVLQN SPYRSREKKN  240
VHREDVDLEG KSNKQLAAVQ KAMFDMVLIS NDENAEKADS ILRESLKIQR RKNLHRNDGR  300
VSRGKKQSGK RDLDTLLIQC AEAVAAGNHR TASEHLNQLR QHSSPYGDAS QRLAHYFADG  360
LEARLAGSGS QIYSTLQHEM PSVPEMLKAY QLFMVALPFL TISNFFANQT IGYLAESVAS  420
LHIIDFGILY GFQWPCLIRC LSKRKGGPPK LRITGIELPL PGLRPAERVE ETGRRLRDYA  480
KELNVPFEYH GIAQKWETIQ LEDLKINKGE LLIANCINQG KNLPDESVIM DSARDSVLKL  540
IRKMNPNIFI HGVVNGTYNS PFFISRFRDA LFHFSSIFDV LETVVPRESS ERINIERYLF  600
GKEAFNIIAC EGSERIERPE TYKQWQSRNI KAGFMQLPLN THIMKKAKEQ AITDYHKDFV  660
IDEDSRWLLL GWKGKIMFAV SSWRPM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein