PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026400907.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 683aa    MW: 76817.5 Da    PI: 5.7999
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026400907.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS379.63.9e-1163116812374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     ++lL++ A+av++gd + a++lL++l++++sp+gd  qR+a+yf+ +L+arla+s+s+++++lp +++s    ++ l+a++lf  + P+lk+s++
  XP_026400907.1 311 QTLLIHSAQAVAAGDSRTASELLKQLRQHSSPYGDCSQRVAHYFADGLEARLAGSGSQICSTLPRKTAS---AADFLKAYQLFMVALPFLKISNF 402
                     689************************************************************999999...9********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                      aNq+I   +e+++++HiiDf+i +G+QWp+L+q L++R++gpp+lRiTg+g pe+g   +e++eetg+rL+++Ae l+vpfe++  +a+++e++
  XP_026400907.1 403 FANQTIGYLAENATTLHIIDFGILYGFQWPCLIQRLSKRKGGPPKLRITGIGLPEPGfrPAERVEETGRRLRDYAEGLNVPFEYHG-IAQKWETI 496
                     ********************************************************9*****************************.7******* PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     +le+L+++++E l+ n+++q ++lldesv l+s+rd+vL+l+++++P+v+v+   +  +ns+ F+ rf +al ++ ++fd l++ +pr++ eri+
  XP_026400907.1 497 QLEDLKINKDELLVANCMYQGKNLLDESVILDSPRDAVLNLIRKMNPNVFVHGILNGTYNSPFFVPRFRDALFHFYSMFDVLDTIVPRDNPERIF 591
                     *********************************************************************************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +Er +l++e+ n++aceg+er+er et +kW+ r ++aGF ++pl++++ k+ak      + + + v+e+  +l+lgWk+r L++vS+W+
  XP_026400907.1 592 IERNFLAKEVLNIIACEGSERVERPETCKKWQLRNTKAGFMQLPLNTHIIKKAKKQATSDYHKDFVVDEDGRWLLLGWKGRILFAVSSWK 681
                     ******************************************************9999888788*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 683 aa     Download sequence    
MDQNHNTFSS NSNSGGSSSD TSSSSNVSQE EEFDFSDVVL NYINQILMEE NNEENNLIFQ  60
KDYLALQSAE KPFYDILGEK YPTDCSPEVQ IDENFTHNNS SQSAVETSWI DELGVYATLL  120
NAESVPSDYT FQAEAQTPQL SYNPSNSLNS IVEGQVESGV GKIDVRSEAE PVWHSRKGVQ  180
EANKFLPGDN NLKRNGFVYG EKEKEASEAA DDVVPLDKDV QQISAYMSRG KKNVHREGID  240
LEGKSNKQLA AVQTAMFDMV LICDGEKGEK ADSVLRESLN IETRKNLHQN GGRRSHGKKQ  300
TGKKDLVVDL QTLLIHSAQA VAAGDSRTAS ELLKQLRQHS SPYGDCSQRV AHYFADGLEA  360
RLAGSGSQIC STLPRKTASA ADFLKAYQLF MVALPFLKIS NFFANQTIGY LAENATTLHI  420
IDFGILYGFQ WPCLIQRLSK RKGGPPKLRI TGIGLPEPGF RPAERVEETG RRLRDYAEGL  480
NVPFEYHGIA QKWETIQLED LKINKDELLV ANCMYQGKNL LDESVILDSP RDAVLNLIRK  540
MNPNVFVHGI LNGTYNSPFF VPRFRDALFH FYSMFDVLDT IVPRDNPERI FIERNFLAKE  600
VLNIIACEGS ERVERPETCK KWQLRNTKAG FMQLPLNTHI IKKAKKQATS DYHKDFVVDE  660
DGRWLLLGWK GRILFAVSSW KPI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-178GRAS family protein