PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026400908.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 681aa    MW: 76956.7 Da    PI: 6.063
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026400908.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS389.34.3e-1193096792374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     ++lL++cA+av++gd + a++lL+++++++sp+gd  qRla++f+ +L+arla+s+s++y++lp ++ s    ++ l+a++lf  + P+ k+s+l
  XP_026400908.1 309 QTLLIRCAQAVAAGDGTTASELLKQIRQHSSPYGDGSQRLAHCFAYGLEARLAGSGSQIYSTLPHKTPS---AADLLKAYQLFMVALPFQKISNL 400
                     689**************************************************************9999...9********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                      aNq+I   +e+++++H+iDf+i +GlQWp+L+++L++R++gpp+lRiTg++ p++g   +e++eetg+rL+++A+el+vpfe++  +a+r+e++
  XP_026400908.1 401 FANQTIGHLAENATALHVIDFGILYGLQWPCLIRQLSKRKGGPPKLRITGIELPRPGfrPAERVEETGRRLRDYAKELNVPFEYHG-IAQRWETI 494
                     ********************************************************9*9***************************.7******* PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     +le+L+++++E l+ n++++  +lldesv l+s+rd+vL+l+++++P+++v+   +  +ns+ F++rf eal ++s++fd+le+ +p+e+ eri 
  XP_026400908.1 495 QLEDLKINKDELLVANCMYRARNLLDESVILDSPRDAVLNLIRKMNPRIFVHGIVNGTYNSPFFVTRFREALFHFSSMFDALETIVPHENPERIL 589
                     *********************************************************************************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +Er +lg+e+ n++aceg+er+er et+++W++r  +aGF  +pl+++++k+ak   r ++ + + ++e+s +l+lgWk+r ++++S+Wr
  XP_026400908.1 590 IERNFLGKEAFNIIACEGSERVERPETFKQWQSRNIKAGFMHLPLNTDIMKKAKEQARLYYHKDFVIDEDSRWLLLGWKGRIIFAISSWR 679
                     *************************************************************889*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 681 aa     Download sequence    
MDQNHNYNDC SGIDTSSPNV SQVDEINFPD AVLKYINQML MEESNEETNF LFQEDSPALQ  60
IAEKSFYEIL GEEYPTSSPD SNPEIQIENF THYSGSENAA ETSWSGEFGA YESLANNTQS  120
VPSDCTFQAA HQLSYNLSNS FNSAAQGLVE SGVGKVRVPD VHSESESIWQ FRKGVEEANK  180
FLPDDNNLII NLERNGFFYG ESKKEGGEAG DVVVELDKDV RQISSYGLRK KKNVHREDIE  240
LEGQSNKQLA AVQTAMFDMV LLCNGENGEK ANSVLRESLK IETSKNSHQN GGRSRSKKHA  300
GKRDLVDLQT LLIRCAQAVA AGDGTTASEL LKQIRQHSSP YGDGSQRLAH CFAYGLEARL  360
AGSGSQIYST LPHKTPSAAD LLKAYQLFMV ALPFQKISNL FANQTIGHLA ENATALHVID  420
FGILYGLQWP CLIRQLSKRK GGPPKLRITG IELPRPGFRP AERVEETGRR LRDYAKELNV  480
PFEYHGIAQR WETIQLEDLK INKDELLVAN CMYRARNLLD ESVILDSPRD AVLNLIRKMN  540
PRIFVHGIVN GTYNSPFFVT RFREALFHFS SMFDALETIV PHENPERILI ERNFLGKEAF  600
NIIACEGSER VERPETFKQW QSRNIKAGFM HLPLNTDIMK KAKEQARLYY HKDFVIDEDS  660
RWLLLGWKGR IIFAISSWRP L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein