PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026401011.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 254aa MW: 28761.9 Da PI: 4.749

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026401011.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.2	8.1e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ lv +++q+G g+W++ ++ g+ R++k+c++rw +yl XP_026401011.1 14 KGPWTAEEDQTLVSYIQQFGHGNWRALPKQAGLLRCGKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	53.6	5.2e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++t E+e +++++++lG++ W+tIa++++ gRt++++k+ w+++l XP_026401011.1 67 RGNFSTHEEETIIQLHEMLGNR-WSTIASRLP-GRTDNEIKNVWHTHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MVRAPCCEKM GLKKGPWTAE EDQTLVSYIQ QFGHGNWRAL PKQAGLLRCG KSCRLRWTNY 60 LRPDIKRGNF STHEEETIIQ LHEMLGNRWS TIASRLPGRT DNEIKNVWHT HLKKRLIQNQ 120 NQPKRATKQR QVNENTKVEP SVSQQSADNS VSPQQSSSSD FSSGVDDSLV LTTDDFDMGI 180 KDEDADYSSG AFPRIDDNVS DADNYYMPEV LAEPKEEFPV AATSTTSVPN IDEDMEFWYS 240 IFVGAGELTE LPEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31180.1	9e-76	MYB family protein