PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026401093.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 370aa MW: 42387.3 Da PI: 6.9041

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026401093.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.3	0.00052	77	99	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk+F + L++H H XP_026401093.1 77 CSydGCGKTFIDAGALRKHSHIH 99 78889**************7766 PP
2	zf-C2H2	15.5	5e-05	104	128	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ Cg+ F ++s LkrH H XP_026401093.1 104 YVCHyeGCGRKFLDSSKLKRHFLIH 128 9********************8877 PP
3	zf-C2H2	22.2	3.6e-07	134	158	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp Cgk Fs nL+ H+rtH XP_026401093.1 134 FVCPheGCGKAFSLDFNLRAHMRTH 158 89**********************9 PP
4	zf-C2H2	18.1	7.6e-06	164	188	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp dCgk++ + + Lk+Hi++H XP_026401093.1 164 HICPyaDCGKRYAHEYKLKTHIKSH 188 68**********************6 PP
5	zf-C2H2	16.3	2.8e-05	227	252	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y Cp C+ks+ + + L+ H+r+ H XP_026401093.1 227 YACPyeGCDKSYIHEYKLNLHLRReH 252 89*********************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MMENYHLYEK RAIPKSKAPA TRWFKEWVPQ DVISTGGKCK ILKWVTEDTI KGLKAKVKEP 60 RAEEQEPEPS TEVLFLCSYD GCGKTFIDAG ALRKHSHIHG ERQYVCHYEG CGRKFLDSSK 120 LKRHFLIHTG ERDFVCPHEG CGKAFSLDFN LRAHMRTHSQ ENYHICPYAD CGKRYAHEYK 180 LKTHIKSHHE KNSPNNPVKH TPPVEKTLAA VKPPAVVYGS ASSDRPYACP YEGCDKSYIH 240 EYKLNLHLRR EHPGHNPEEH VGKRAREADN EMDEGSDQDM YGGKSSSGKN VKRAKTKPVP 300 KTVTPKVVPQ RKAPAVIPTN YSLTRKPLPS KEAYEEEDSE ETEEEDHDNV DEDGWRYAEN 360 NDDDEETDED

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MMENYHLYEK RAIPKSKAPA TRWFKEWVPQ DVISTGGKCK ILKWVTEDTI KGLKAKVKEP  60
RAEEQEPEPS TEVLFLCSYD GCGKTFIDAG ALRKHSHIHG ERQYVCHYEG CGRKFLDSSK  120
LKRHFLIHTG ERDFVCPHEG CGKAFSLDFN LRAHMRTHSQ ENYHICPYAD CGKRYAHEYK  180
LKTHIKSHHE KNSPNNPVKH TPPVEKTLAA VKPPAVVYGS ASSDRPYACP YEGCDKSYIH  240
EYKLNLHLRR EHPGHNPEEH VGKRAREADN EMDEGSDQDM YGGKSSSGKN VKRAKTKPVP  300
KTVTPKVVPQ RKAPAVIPTN YSLTRKPLPS KEAYEEEDSE ETEEEDHDNV DEDGWRYAEN  360
NDDDEETDED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G06634.1	1e-137	C2H2 family protein