PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026401281.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 282aa MW: 33048.1 Da PI: 7.9197

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026401281.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.9	3.7e-16	17	64	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd+ll ++++++G g W+ ++ + g++R++k+c++rw++yl XP_026401281.1 17 KGTWSKEEDQLLRRCIEKFGEGKWSQVPLRAGLNRCGKSCRLRWLDYL 64 799******************************************997 PP
2	Myb_DNA-binding	45.1	2.3e-14	70	115	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg + ++E +l+++ +k+lG++ W++Ia +++ gRt++++k++++++l XP_026401281.1 70 RGDFEPDELDLIIRMHKLLGNR-WSLIAGRLP-GRTANDIKNYYNTHL 115 78999***************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence
MESSSSIVFA EMRGLRKGTW SKEEDQLLRR CIEKFGEGKW SQVPLRAGLN RCGKSCRLRW 60 LDYLRPNIKR GDFEPDELDL IIRMHKLLGN RWSLIAGRLP GRTANDIKNY YNTHLKKNSF 120 FKYHTDQEEQ VVMVENLDNN INDHCPRVPK RKCQLLLDIN NVDDGNNVNL LKMKTKIIRP 180 LPRRFSRGEW QWITNKALPE NRTDNINSAT AATTPNMDSS KRSTKFSEGI DDDHRTHYFN 240 YDNDQEVDEG GNVADNNYWN SFYLDHNSGH MLGEEQDPYF IF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	1e-57	MYB family protein