PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026401331.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

YABBY

Protein Properties

Length: 240aa MW: 26616.9 Da PI: 8.2317

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026401331.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	238.1	1.9e-73	24	203	5	170
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee...............lleelkveeenlks 84 s s+q+CyvqCnfC+t+lavsvP tslfk+vtvrCGhCt+llsvn++ + +++ s +++ +++ +lee+++++ ++ XP_026401331.1 24 SPSDQLCYVQCNFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRGLHLPTPTPSTNNNANNNNchlqlghdffspsfnILEEMQHQSVQTPN 118 579********************************************9877777664444444467888888999999988888777666544 PP YABBY 85 nv.ekeesastsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 ++++++++s+ s + + +++p++ppv++PPekrqrvPsaynrfik+eiqrika+nPdi+hreafsaaaknWahfP+ihfgl XP_026401331.1 119 LSlMNQRNENASIVS-S-VRGGYDQLPKAPPVNKPPEKRQRVPSAYNRFIKDEIQRIKAGNPDITHREAFSAAAKNWAHFPHIHFGL 203 440444444444433.3.35667889*********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MSSSISSSSS SSSCLDHLMN ISPSPSDQLC YVQCNFCDTV LAVSVPCTSL FKTVTVRCGH 60 CTNLLSVNMR GLHLPTPTPS TNNNANNNNC HLQLGHDFFS PSFNILEEMQ HQSVQTPNLS 120 LMNQRNENAS IVSSVRGGYD QLPKAPPVNK PPEKRQRVPS AYNRFIKDEI QRIKAGNPDI 180 THREAFSAAA KNWAHFPHIH FGLMPDQSTK KTNVRQQERD DLLLKDGFFS ATTNIGVSPY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45190.1	2e-83	YABBY family protein