PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026401380.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HD-ZIP
Protein Properties Length: 337aa    MW: 37381.6 Da    PI: 8.0114
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026401380.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.83.9e-18167221256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk+ +++++q  +Lee F+++++++ +++  LAk+l+L  rqV vWFqNrRa+ k
  XP_026401380.1 167 RKKLRLSRDQSAILEETFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 221
                     788899***********************************************98 PP
2HD-ZIP_I/II125.91.8e-40167256191
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                     +kk+rls++q+++LEe+F+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +l
  XP_026401380.1 167 RKKLRLSRDQSAILEETFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELR-AL 256
                     69*************************************************************************************9.55 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MFVEKEDLGL SLSLCSSTST TTADNRYPLQ LNLMPPSAAS VSNNPSPFLI HHQKTNSITN  60
WNEAFGSSDR ITAEMYRGET RSFLRGIDVN RMPSTTATID CEEEVGVSSP NSTVSSISGN  120
KRRSIERDTI NCSGGDGEDN EIERASSRSG GNGGGMNSDD EDGENSRKKL RLSRDQSAIL  180
EETFKEHNTL NPKQKLALAK QLNLRPRQVE VWFQNRRART KLKQTEVDCE FLKRCCENLT  240
EENRRLQKEV QELRALKLSP QFYMQMTPPT TLTMCPSCER VAVSASTNAS AAGSTPAVPA  300
PSVAAEAAHH RHHQQMSAQQ RALPTNPWSQ TPVVSRR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1166172SRKKLRL
2216224RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44910.11e-66HD-ZIP family protein