PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026401392.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB_related
Protein Properties Length: 346aa    MW: 38053.4 Da    PI: 7.8274
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026401392.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.51.3e-12109153347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++ ++ + ++lG+g+W+ I+r    +Rt+ q+ s+ qky
   XP_026401392.1 109 AWTEEEHKMFLLGLQKLGKGDWRGISRNYVITRTPTQVASHAQKY 153
                      7*****************************89************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MTRKCSGCSN NGHNSRTCPA TNKVVKLFGV RLDAGASSSS SMRKSVSMCN LSTLSHNASF  60
QNFSNLGNQD SSSSPGGDDQ NNNNGHINDG YASEDYVKGS SRERKKGVAW TEEEHKMFLL  120
GLQKLGKGDW RGISRNYVIT RTPTQVASHA QKYFIRQCNM SRRKRRSSLF DMVPDEQSTD  180
APQVGSALPD HPQAEIQNIT LSPTPTIGEE CESMDSTNST EKQPLVIQHP VAMPIMQSSY  240
PVMCPPFYYP YYPYAVPVWP GYNTEQTTTE ETHEVVKPMA THIKSPMNVE QLGLMSKLTI  300
GESDDKKEQS LSTSLSLQIP GESSSRPSAF HQGQTYVRAI PGGSPG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.16e-68MYB_related family protein