PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026401721.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HB-other

Protein Properties

Length: 409aa MW: 45206.4 Da PI: 7.2128

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026401721.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	21.2	5.1e-07	2	62	8	56
-HHHHHHHHHHHHH..SSS--HHHHHHHHHHC..........TS-HHHHHHHHHHHHHHHH CS Homeobox 8 tkeqleeLeelFek..nrypsaeereeLAkkl..........gLterqVkvWFqNrRakek 56 ++ q+ e+e++ +k ps e ++ +A+k + ++qV +WFqNrR+ +k XP_026401721.1 2 SQFQVAEMEACLQKanFIIPSLEVIRSIAEKFsasaersgkmIVHQKQVLNWFQNRRYAQK 62 56677788888876323458999999999999999999998889*************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MSQFQVAEME ACLQKANFII PSLEVIRSIA EKFSASAERS GKMIVHQKQV LNWFQNRRYA 60 QKAKTMKPSE NLSVTPKSRE DLVPLRNVPH IMPVPSGRST SDSNALMEFE ARSSRDGAWY 120 DVAAFISHRM FETGDPEVRV RFAGFGAEED EWINVRKHVR QRSLPCEASE CVAVLAGDLI 180 LCFQEGKDQA LYYDAHVLDA QRRRHDVRGC RCRFLVRYDH DQAEEIVQLR KVCRRPETDY 240 RLRLLHSARE FVRVDPKREM GEKTTSAVNS CSRNYSNSEP VKSHPAEVTA DRKVKESPVG 300 VTAETIGTAV AIKVETGTKC NDNIGNPDNQ MPSGGDAVTA SAITSVRNNP NTSTNSGNSE 360 NDKTASANTS ASNNPNTITT SGSSENDEMA VATISASSNP NTVTTSGND

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MSQFQVAEME ACLQKANFII PSLEVIRSIA EKFSASAERS GKMIVHQKQV LNWFQNRRYA  60
QKAKTMKPSE NLSVTPKSRE DLVPLRNVPH IMPVPSGRST SDSNALMEFE ARSSRDGAWY  120
DVAAFISHRM FETGDPEVRV RFAGFGAEED EWINVRKHVR QRSLPCEASE CVAVLAGDLI  180
LCFQEGKDQA LYYDAHVLDA QRRRHDVRGC RCRFLVRYDH DQAEEIVQLR KVCRRPETDY  240
RLRLLHSARE FVRVDPKREM GEKTTSAVNS CSRNYSNSEP VKSHPAEVTA DRKVKESPVG  300
VTAETIGTAV AIKVETGTKC NDNIGNPDNQ MPSGGDAVTA SAITSVRNNP NTSTNSGNSE  360
NDKTASANTS ASNNPNTITT SGSSENDEMA VATISASSNP NTVTTSGND

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18380.1	1e-104	HB-other family protein