PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026401963.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 821aa MW: 89956.2 Da PI: 5.9457

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026401963.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.2	2.9e-16	24	68	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE+ ++++a k++G W +I +++g ++t+ q++s+ qk+ XP_026401963.1 24 RERWTEEEHNRFLEALKLHGRA-WQRIEEHIG-TKTAVQIRSHAQKF 68 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 821 aa Download sequence
MDSYSCGEDL FLKARKPYTI TKQRERWTEE EHNRFLEALK LHGRAWQRIE EHIGTKTAVQ 60 IRSHAQKFFS KLEKEAVVKG VSLGQTLEIE IPPPRPKRKP SYPYPRKSYR ASSITSSVPV 120 TDGKLLTLTS SLYPGSEISE LKNDPSSQNP GGTENSAREK ETLDEENCLE DNLFQEASCV 180 SVPSASQSSI STSMVLQKIC TFREFVPSRK DIIESKDHIG KGDYPKLDTK DVLKSDRTEA 240 NLSHVDINGT GEMLSLKNSC HSSQDKLVRG NNTDKLKKPE NVGQLSTADE IQANHSYPRH 300 VPVHIVNMSS GACVQPRPPG VYPTPNICHL GSHGNPYIFP NLTVSAATQP NSNITSRSSL 360 HHQTLPNFPP PFAPLHNQET QKSAQNISSA FGGLLMSALL QNPAAHTASL AASFWPTPNG 420 ETSLDSSAGP LGGFLSEQMS ATPNLAAIAA ATVAAASAWW AAHGMLPLCP PMHTGFSYPQ 480 PQPTTATPMD ITHAPLVDNN ERQDNSTNNS PWEAEQIDPE VSEATKPQNR TSKWQTLSSS 540 DSAESGGGSQ SNCNKPKSAG EEQNPDTTTE LVHDSNKSKM RKKVDRSSCG SNTASSTEVE 600 TDALEQDEEE PEQDQAEKER EESKEADSNH QVGEHNRRSR SSTSNTNGNT SANTNGSTST 660 NTNTNESWKE VSEEGRIAFQ ALFTRQVLPQ SFSPPPDPKI IVQQQQQQQQ PAENIVMEEL 720 KQISDVKDDD DEQMLQLNLS SSNSWGVNPE HSSLLDNNVT ESSFLSMGLG HGKFKARRTG 780 FKPYKRCSVE AKESRITGGS GQCCEEKGPK RIRLEGDAST L

Sequence ? help Back to Top

Protein Sequence Length: 821 aa Download sequence

MDSYSCGEDL FLKARKPYTI TKQRERWTEE EHNRFLEALK LHGRAWQRIE EHIGTKTAVQ  60
IRSHAQKFFS KLEKEAVVKG VSLGQTLEIE IPPPRPKRKP SYPYPRKSYR ASSITSSVPV  120
TDGKLLTLTS SLYPGSEISE LKNDPSSQNP GGTENSAREK ETLDEENCLE DNLFQEASCV  180
SVPSASQSSI STSMVLQKIC TFREFVPSRK DIIESKDHIG KGDYPKLDTK DVLKSDRTEA  240
NLSHVDINGT GEMLSLKNSC HSSQDKLVRG NNTDKLKKPE NVGQLSTADE IQANHSYPRH  300
VPVHIVNMSS GACVQPRPPG VYPTPNICHL GSHGNPYIFP NLTVSAATQP NSNITSRSSL  360
HHQTLPNFPP PFAPLHNQET QKSAQNISSA FGGLLMSALL QNPAAHTASL AASFWPTPNG  420
ETSLDSSAGP LGGFLSEQMS ATPNLAAIAA ATVAAASAWW AAHGMLPLCP PMHTGFSYPQ  480
PQPTTATPMD ITHAPLVDNN ERQDNSTNNS PWEAEQIDPE VSEATKPQNR TSKWQTLSSS  540
DSAESGGGSQ SNCNKPKSAG EEQNPDTTTE LVHDSNKSKM RKKVDRSSCG SNTASSTEVE  600
TDALEQDEEE PEQDQAEKER EESKEADSNH QVGEHNRRSR SSTSNTNGNT SANTNGSTST  660
NTNTNESWKE VSEEGRIAFQ ALFTRQVLPQ SFSPPPDPKI IVQQQQQQQQ PAENIVMEEL  720
KQISDVKDDD DEQMLQLNLS SSNSWGVNPE HSSLLDNNVT ESSFLSMGLG HGKFKARRTG  780
FKPYKRCSVE AKESRITGGS GQCCEEKGPK RIRLEGDAST L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46830.1	2e-44	MYB_related family protein