PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026402391.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HD-ZIP

Protein Properties

Length: 343aa MW: 39000.9 Da PI: 6.9632

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026402391.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.7	8.5e-18	98	151	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k XP_026402391.1 98 KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 151 456899***********************************************9 PP
2	HD-ZIP_I/II	128.8	2.2e-41	97	187	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl+ eqvk+LE++Fe +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktk lEkdy+ Lkr++da+k++ne+L++++++Lr+e+ XP_026402391.1 97 EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKSLEKDYDILKRQFDAVKADNEALQSQNKKLRDEV 187 69**************************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MGSCNGMAFF PSSFMVQNSS HHDQEDHHHH PTSFNSVLPS SFTSLRPVDF HGTGVASLPG 60 KKTSSMAFTG FDVCDHHQEN NNNGEEDYSD DGSQMGEKKR RLNMEQVKTL EKNFELGNKL 120 EPERKMQLAR ALGLQPRQIA IWFQNRRARW KTKSLEKDYD ILKRQFDAVK ADNEALQSQN 180 KKLRDEVLAL KSKEIPTHEY IINLNKETDQ QGCSSSSNRS DNSSEINLDL SRRSTTTSSA 240 IDSPTTLSSS HRQQIVSSTN TRPTTITTLF PSSSSSTSRP NQIQVAQQIL HHQNSQQYHQ 300 KSTSVDNALV QPHQEESLIN NIFCGIDDQP NFWPWQEQQQ FHN

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MGSCNGMAFF PSSFMVQNSS HHDQEDHHHH PTSFNSVLPS SFTSLRPVDF HGTGVASLPG  60
KKTSSMAFTG FDVCDHHQEN NNNGEEDYSD DGSQMGEKKR RLNMEQVKTL EKNFELGNKL  120
EPERKMQLAR ALGLQPRQIA IWFQNRRARW KTKSLEKDYD ILKRQFDAVK ADNEALQSQN  180
KKLRDEVLAL KSKEIPTHEY IINLNKETDQ QGCSSSSNRS DNSSEINLDL SRRSTTTSSA  240
IDSPTTLSSS HRQQIVSSTN TRPTTITTLF PSSSSSTSRP NQIQVAQQIL HHQNSQQYHQ  300
KSTSVDNALV QPHQEESLIN NIFCGIDDQP NFWPWQEQQQ FHN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69780.1	4e-78	HD-ZIP family protein