PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026402708.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 533aa    MW: 60252.4 Da    PI: 9.6491
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026402708.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.41.1e-1229119198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffk+  ++++ k++rl +p +f++++g++   s   +++ +sg  W++ l  ++++g + ++ G +eF +   + +g  +vF+++++s+f  +v 
  XP_026402708.1  29 FFKII-QAHAIKHKRLGIPEEFLKKFGNE--LSDSAIIKVPSGSIWRIGL--TNRGGVTSFEYGCQEFMEFYSISVGHLLVFRYNRNSRF--HVL 116
                     66655.99***************999855..7778999************..9**999**************************999999..999 PP

                     EE- CS
              B3  96 vfr 98 
                     +f+
  XP_026402708.1 117 IFD 119
                     997 PP
2B365.48.4e-21300395198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffk+  ++ + ++g++ +p +fa+ + +  +++  +tl  ++g+ W+v l+ + ksg+++l+kGWk+Fv++n+L++gD++vF+ ++ ++fe++v+
  XP_026402708.1 300 FFKAVRRPFNISNGLVNMPGNFATPYLK--HRTALVTLSVSDGKLWDVSLTSSIKSGTTTLSKGWKQFVSDNQLNQGDVCVFEPVDPKKFEMNVH 392
                     889999999999***********99953..356689999********************************************9988******** PP

                     EE- CS
              B3  96 vfr 98 
                     +fr
  XP_026402708.1 393 IFR 395
                     *98 PP
3B358.98.9e-19434527298
                     EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     fkv++   +l++g +++p  fa  +  +   ++++++  + g++We++++   k++r  l kGW +Fv +n+L+egD++vF+l++r++fe++  +
  XP_026402708.1 434 FKVTMCRTYLTLGHVIVPAAFAVPYL-E--HEIKVRISGRGGKTWEMQCNLLHKPDRAKLLKGWDKFVLDNHLNEGDVCVFELVDRERFEMKAYI 525
                     67788888899999********9994.2..3468*****************99999999999********************************9 PP

                     E- CS
              B3  97 fr 98 
                     fr
  XP_026402708.1 526 FR 527
                     98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 533 aa     Download sequence    
MSSKQMSHQS KKRKKMESSA SASSSPLHFF KIIQAHAIKH KRLGIPEEFL KKFGNELSDS  60
AIIKVPSGSI WRIGLTNRGG VTSFEYGCQE FMEFYSISVG HLLVFRYNRN SRFHVLIFDI  120
SATEIEYPVC NFKTNFKNKA QEIDTDSCSS DSNNENSTQS EPSSSRESQV NLETEPVDEH  180
DFPKQRKVFA ATVTTKRSRF NTSRVTESNE RALRAAEVFL TLSFQFAKKQ IISAVLFERY  240
YMHISFSDSN NETSTQNVSS SSRGGQVNME TEEPVFCSNV TQAKERALAA AEAFTSGNPF  300
FKAVRRPFNI SNGLVNMPGN FATPYLKHRT ALVTLSVSDG KLWDVSLTSS IKSGTTTLSK  360
GWKQFVSDNQ LNQGDVCVFE PVDPKKFEMN VHIFRVFQQT CSGKKLETNA HRAAISVEKS  420
FAAANAFKSK KPYFKVTMCR TYLTLGHVIV PAAFAVPYLE HEIKVRISGR GGKTWEMQCN  480
LLHKPDRAKL LKGWDKFVLD NHLNEGDVCV FELVDRERFE MKAYIFRVVQ SGE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11115KKRKK
21141KKRKKMESSASASSSPLHFFKIIQAHAIKHK
31242KKRKKMESSASASSSPLHFFKIIQAHAIKHK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.15e-23B3 family protein