PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026402839.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 255aa MW: 30537.2 Da PI: 8.932

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026402839.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.8	5.1e-18	4	49	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l ++v+++G+++W++Ia++++ gR++k+c++rw++ XP_026402839.1 4 RGHWRPAEDEKLRELVERYGPHNWNAIAEKLQ-GRSGKSCRLRWFNQ 49 899***************************.*********996 PP
2	Myb_DNA-binding	55.1	1.7e-17	56	99	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T eE+e+l++ ++ +G++ W+ Iar ++ gRt++ +k++w+ XP_026402839.1 56 RTPFTDEEEERLLQSHRIHGNR-WAVIARLFP-GRTDNAVKNHWHV 99 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MCTRGHWRPA EDEKLRELVE RYGPHNWNAI AEKLQGRSGK SCRLRWFNQL DPTINRTPFT 60 DEEEERLLQS HRIHGNRWAV IARLFPGRTD NAVKNHWHVI MARRCRERSR FYAKRAAQNL 120 INERNKYTIR QTRINPMIIM NSESRNLTSL EEYYRRHQNQ MMMLHNTTSR NQSLKHLYYQ 180 TPTDPRSKAL EDNSNQIEFY DFLCVNTDSN RSEVINNTAK NYRDEEEVEQ EVRDQAATCS 240 EVVPFIDFFS VERPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17950.1	4e-79	MYB family protein