PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026402867.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HD-ZIP
Protein Properties Length: 702aa    MW: 77406.7 Da    PI: 6.3095
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026402867.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox67.32e-212378156
                    TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    +++ ++++++q++eLe+ F+++++p++++r +L++ lgL+ rq+k+WFqNrR+++k
  XP_026402867.1 23 KKRYHRHSPHQIQELESIFKECPHPDEKQRMQLSRDLGLEPRQIKFWFQNRRTQMK 78
                    688899***********************************************998 PP
2START175.24.1e-552164401206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     e+a++a++el+++ +a+ep+W ks+    e++n + +  +f+++++      ++ea+r+sgvv+m+  +lv ++ld++ +W e+++    +a t+
  XP_026402867.1 216 EIANAAMDELIRLLQAGEPLWIKSPidgkEMLNVEAYENSFPRANNaksldARTEASRDSGVVIMNGLQLVDIFLDSN-KWIEMFPtivaDARTI 309
                     6899***************************************999*****9**************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     e + +g      g lqlm+   q+lsplvp R+f+f+R+++q ++g w+i+dvS d+ ++++ + s    +++pSg+lie++sng++kv w+ehv
  XP_026402867.1 310 EILAPGmpgsrsGSLQLMYEVVQVLSPLVPiREFYFLRHCQQIQQGLWAIADVSFDVSRENQ-TNSAFLTRKRPSGCLIEEMSNGYCKVNWIEHV 403
                     *************************************************************9.56666668************************ PP

                     E--SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlp.hwllrslvksglaegaktwvatlqrqcek 206
                     ++++++  h l+r l++sg+a+ga +w+a lqr ce+
  XP_026402867.1 404 EVEDKSQsHRLYRDLINSGAAFGAERWLAVLQRICER 440
                     **999988***************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 702 aa     Download sequence    
MDSGCGSGDE QDISDPNNQR NKKKRYHRHS PHQIQELESI FKECPHPDEK QRMQLSRDLG  60
LEPRQIKFWF QNRRTQMKAQ HERADNSALR HENDKIRCEN IAIREALKRV ICPSCGSPED  120
SYFDEQKLRM ENAHLKEELD RVSSICAKYI GRPISRLPSI QPIASSLDLS VGSYGHGMSG  180
ASTLDLDLLP GCSSSIAPLP LQAIAITDME KSIMTEIANA AMDELIRLLQ AGEPLWIKSP  240
IDGKEMLNVE AYENSFPRAN NAKSLDARTE ASRDSGVVIM NGLQLVDIFL DSNKWIEMFP  300
TIVADARTIE ILAPGMPGSR SGSLQLMYEV VQVLSPLVPI REFYFLRHCQ QIQQGLWAIA  360
DVSFDVSREN QTNSAFLTRK RPSGCLIEEM SNGYCKVNWI EHVEVEDKSQ SHRLYRDLIN  420
SGAAFGAERW LAVLQRICER FASLLVSNPS QELVGVIPSP DGKRSMMKLA QRMINSLCTS  480
ICATNTNHRW TSLTGDNDTG VRVSFHKGTD PGQPNGVICS ATTSIWLPVS AQNVFNFFKD  540
KRTRPQWDVL SDGNPVQEVA HISNGAHPGN CISVLRSMNA SQNNILILQE SCTDPSGSMV  600
VYSPVELPSV NIAMGGEDPS FVPLLPSGFI VCSDGRTDQG GASTSSNIQG SSGTGSLVTV  660
AFQILVSNLP TAKLNFESIA TVSNLISTTV HQIKTALNCS GS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0HD-ZIP family protein