PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026403419.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 660aa    MW: 74493.8 Da    PI: 4.8657
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026403419.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS325.31.2e-993556593308
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     +lL++cA+av+++d + a++lL++l++++sp+gd +qRla +ft +L+arla+s+s++y++lp ++ s  ++++ l+a++lf  + P+ k+s++ 
  XP_026403419.1 355 SLLIQCAQAVATDDRRIASELLKQLRQHSSPSGDGLQRLANCFTDGLEARLAGSGSQIYSTLPQKSPS--SVADMLKAYQLFMTAIPFKKISNFF 447
                     79************************************************************888877..6************************ PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     aNq+I + +e+++ +Hi+Df+i +G+QWp+L+q L++R++gpp+lRiTg++ p++g   +e++eetg rL+++A+el+vpfe+++ +a+++e+++
  XP_026403419.1 448 ANQTINDLAENATSLHIVDFGILYGFQWPCLIQCLSKRKGGPPKLRITGIELPRPGfrPAERVEETGCRLRDYAKELNVPFEYHA-IAQKWETIQ 541
                     *******************************************************9*9***************************.7******** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     le+L++k++E l+ n+ ++  +lldesv l+s+rd+vL+l+++++P+++++   +  +ns+ F++rf eal ++s+lfd le+ +pre+ er+++
  XP_026403419.1 542 LEDLKIKKDELLVANCLFRARNLLDESVILDSPRDAVLNLIRKMNPDLFIHGILNGTYNSPFFVTRFREALFHFSTLFDVLETIIPRENIERMTI 636
                     *********************************************************************************************** PP

            GRAS 286 Erellgreivnvvacegaerrer 308
                     Er llg+e++n++aceg++r+er
  XP_026403419.1 637 ERDLLGKEAMNIIACEGSNRVER 659
                     *********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 660 aa     Download sequence    
METTLDQNFM DQNTIFSSTG SHTTSFNIGP EEDSTGEFDF SDVVLKYINQ ILMEDTTEER  60
NCLIQDSSAL QAAEKPFYEM LGEKYPTSPD CNTEVQVENF THYSSCNNAV ETNWIDELGK  120
YISLSNTQSF PNDYTFQATP ELSYNHSNGF SSVVERLVEP SEGKVQLVSD AYCESELIRQ  180
LTPRLSYNHS SGINSVVEGP VKSPVGNVQV PDVYCESELE MQYRKGVEEA NKFLPNGNNL  240
ILNFESKDFL RYDRNKEASD VVVELEKKDG NGSRRKKNVH REDGNLEEGR NYKQLAAVEA  300
AMFDMVLVNG ENEEQAESTI RKSLKVEASK NLQQNGGKSH GKKQTSKTGT VDLWSLLIQC  360
AQAVATDDRR IASELLKQLR QHSSPSGDGL QRLANCFTDG LEARLAGSGS QIYSTLPQKS  420
PSSVADMLKA YQLFMTAIPF KKISNFFANQ TINDLAENAT SLHIVDFGIL YGFQWPCLIQ  480
CLSKRKGGPP KLRITGIELP RPGFRPAERV EETGCRLRDY AKELNVPFEY HAIAQKWETI  540
QLEDLKIKKD ELLVANCLFR ARNLLDESVI LDSPRDAVLN LIRKMNPDLF IHGILNGTYN  600
SPFFVTRFRE ALFHFSTLFD VLETIIPREN IERMTIERDL LGKEAMNIIA CEGSNRVERP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-158GRAS family protein