PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026403420.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 761aa    MW: 85861.9 Da    PI: 6.4168
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026403420.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS384.99.2e-1183887591374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++cA+av+++d + a +lL+++++++sp+gd  qRla++f+ +L+arla+++s+ly++l  ++ts    ++ l+a++l+  ++P+ k+s+
  XP_026403420.1 388 LRTLLIHCAQAVAADDRRTAGELLKQIRQHSSPSGDGSQRLAHCFADGLEARLAGTGSQLYSTLLFKKTS---AADILKAYQLYMAACPFKKISN 479
                     6789**************************************************************9999...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     +  Nq   + +e+++++Hi+Df+i  G+QWp+L++ L++R++gpp+lRiTg++ p++g   +e++eetg+rL+ +Aee++vpfe+++ +a+++e+
  XP_026403420.1 480 FFSNQIFSDLAETATTLHIVDFGILWGFQWPCLIKRLSNRKGGPPKLRITGIDFPQPGfrPAERVEETGRRLRAYAEEFKVPFEYHA-IAQKWET 573
                     *********************************************************9*****************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++le+L+v+++E l+Vn+++++ +llde+v l+s+r++vLklvk+++P v+v+   +   +++ F++rf eal +ys+lfd+lea++pre+ er+
  XP_026403420.1 574 IQLEDLKVNKDELLVVNCMYRMRNLLDETVILDSPRNAVLKLVKKMNPAVFVHGIVNGAFSAPFFVTRFREALFHYSSLFDMLEANVPREHPERA 668
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      +E +l+g+e+vnv+aceg+er+er et+++W+ r  +aGF ++pl+++++k++k   ++ + + + v+e+s++++lgWk+r ++++S+Wr
  XP_026403420.1 669 LLEGRLFGKEAVNVIACEGSERVERPETYKQWQVRNVRAGFVQLPLKKDIMKKVKDKAKELYHKDFVVDEDSQWMLLGWKGRIIYALSSWR 759
                     **************************************************************888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 761 aa     Download sequence    
MVMYPSVFDS INGLRVNTES ESDENLMSFF RLEEYSLGQN LMDQSPNFSS NTSGIATSSS  60
SSSSSSSSSS SSNVSPSSPE EYDFSDVVLK YINQMLMEED IEEKNCMFQE SSGLQAAGKP  120
FYEILGEKPP SPHLNPAFYA DNHYPENQVQ KFAHYHAQSN NSSNGSNNAV EINWIGELGE  180
YRSLFDTQSI PSDYTFQASP QSSFNPSNGF DSVVEVLVES PPVAKVQVPD MYCESEPIWQ  240
FRKGVEEANK FLPNGVNLLL NLESNASFSN ERKKEEASDV LVKLEKKDER EISPNGSRGK  300
KNVHRADIDV EEGRSNKQSA VFSEETIRNS MLDMVLLCKG DDEKANITLR ESIKIEANKN  360
LQQNGQSKGS NGKSRGKKQT AKRDVVDLRT LLIHCAQAVA ADDRRTAGEL LKQIRQHSSP  420
SGDGSQRLAH CFADGLEARL AGTGSQLYST LLFKKTSAAD ILKAYQLYMA ACPFKKISNF  480
FSNQIFSDLA ETATTLHIVD FGILWGFQWP CLIKRLSNRK GGPPKLRITG IDFPQPGFRP  540
AERVEETGRR LRAYAEEFKV PFEYHAIAQK WETIQLEDLK VNKDELLVVN CMYRMRNLLD  600
ETVILDSPRN AVLKLVKKMN PAVFVHGIVN GAFSAPFFVT RFREALFHYS SLFDMLEANV  660
PREHPERALL EGRLFGKEAV NVIACEGSER VERPETYKQW QVRNVRAGFV QLPLKKDIMK  720
KVKDKAKELY HKDFVVDEDS QWMLLGWKGR IIYALSSWRP M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein