PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026403472.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB_related
Protein Properties Length: 426aa    MW: 48117.1 Da    PI: 5.5671
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026403472.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding377.7e-12332375146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      +++W++++ el++++++q+G++ ++ I + ++ gRt+ q+k+++ k
   XP_026403472.1 332 KQSWSQQDTELFYEGIRQFGTD-FAMIQQLFP-GRTRHQVKLKYKK 375
                      789*******************.*********.***********87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    
MRLEREEEAF GGINSQDTAT GNPFLVPCAN ESLEEDLTPT FPSDSFIDSS TMGFSSSVPG  60
DASPEQLTHE LESSAERSYP ELVTQEEHVD LQAGHVISGE ENERSVSAAS NKNGTGKSSR  120
LLRNEVSPPV AADEIAEETR EDQHLLSEPA QNSSGNLDNN DDYCRGEEAP NSNRTPQNSK  180
KPVSGNEKTG RRRKKADVPD SSDKELPKKK FSHSTRRNRR KVDKILLETP DHEIDPRKLT  240
LKDLILLAEA KERLLSKDPN AAKNPLPNQR NTRDTSFGEE DSFGLPEDSF GLRDDSFGLR  300
DDSSFGYQDD EQAAPSAQPK LNYHTFMKRT SKQSWSQQDT ELFYEGIRQF GTDFAMIQQL  360
FPGRTRHQVK LKYKKEEKQH PQRLSDALTN RSKNHSRFEL VIERLKKLQL KLRLSKILTE  420
MTNLLA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39160.19e-48MYB_related family protein