PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026403496.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

GeBP

Protein Properties

Length: 391aa MW: 44048.4 Da PI: 4.5964

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026403496.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	102.3	4e-32	138	232	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 ++ r+w+ee eivlLqG++d+ k+gksp d ++fyef+k+si+++vsk+ql++Kir+ K +++++++k sg+ +fsk+h ++++elsk+iW XP_026403496.1 138 KSARVWTEEGEIVLLQGMVDY-IKKGKSPNTDSNGFYEFIKGSIDSDVSKEQLSSKIRHAKVRYRQNEAKEMSGEVLTFSKSHFENCYELSKMIW 231 689****************.899******************************************************************** PP DUF573 97 g 97 g XP_026403496.1 232 G 232 8 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MTLKNPPSVS YSSASEEERE VEEEVVNNKE EESDDSGEEE EGGDDDEETE KSRFYVVPNS 60 KSKSKDAEEE EDSDDDSESD EQIPIEKEEE VKKPKHTSIP AKRPAATPAA KPRVEAEKSA 120 KRRKKNNDAN GGEESEKKSA RVWTEEGEIV LLQGMVDYIK KGKSPNTDSN GFYEFIKGSI 180 DSDVSKEQLS SKIRHAKVRY RQNEAKEMSG EVLTFSKSHF ENCYELSKMI WGADKKQEND 240 GRKKKGKDGE GETIEVDGAT NGKSKSKSRK KKASNDAGVS EKHEEGVKVD DVADQLKATV 300 EKEEEEEEEE EEGFGLNELI LSKEQIIRPP PGLESFLNRR AFRLIDPTKG KTLEKKWKDL 360 QVAETELFLK RIDLVREYSS LALEALKSPT S

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MTLKNPPSVS YSSASEEERE VEEEVVNNKE EESDDSGEEE EGGDDDEETE KSRFYVVPNS  60
KSKSKDAEEE EDSDDDSESD EQIPIEKEEE VKKPKHTSIP AKRPAATPAA KPRVEAEKSA  120
KRRKKNNDAN GGEESEKKSA RVWTEEGEIV LLQGMVDYIK KGKSPNTDSN GFYEFIKGSI  180
DSDVSKEQLS SKIRHAKVRY RQNEAKEMSG EVLTFSKSHF ENCYELSKMI WGADKKQEND  240
GRKKKGKDGE GETIEVDGAT NGKSKSKSRK KKASNDAGVS EKHEEGVKVD DVADQLKATV  300
EKEEEEEEEE EEGFGLNELI LSKEQIIRPP PGLESFLNRR AFRLIDPTKG KTLEKKWKDL  360
QVAETELFLK RIDLVREYSS LALEALKSPT S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	121	163	KRRKKNNDANGGEESEKKSARVWTEEGEIVLLQGMVDYIKKGK
2	122	164	KRRKKNNDANGGEESEKKSARVWTEEGEIVLLQGMVDYIKKGK
3	242	272	RKKKGKDGEGETIEVDGATNGKSKSKSRKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00390.1	8e-23	GeBP family protein