PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026403605.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 221aa MW: 25459.7 Da PI: 6.2362

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026403605.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.7	4.1e-08	130	170	9	54
HHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 r RR+ri +++ L++l+P a K++ a++L +Av+Y+k L XP_026403605.1 130 ARHRRERISERMRILQRLVPGgA------KMDTASMLDEAVRYVKFL 170 699***************966......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 221 aa Download sequence
MASMEQPTPI STPYLHDDQL ACDVIFENFH SQQITQPTSS SCSSHYAPIH SDHHEHQQQQ 60 LIRTLSYCSE EKKQEKCEKG SEEEEEELDA MKEMMYKIAA MQPIDIDPAT LSKPKRRNVR 120 ISNDPQSVAA RHRRERISER MRILQRLVPG GAKMDTASML DEAVRYVKFL KKQVIKLQSS 180 NQNSPRLAVP IINDDYRWHV PSSENNIVTF TETAEDYCIP S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09750.1	2e-36	bHLH family protein