PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026404003.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB_related
Protein Properties Length: 316aa    MW: 35138.8 Da    PI: 9.6192
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026404003.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.95.3e-145195147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT++E++++++a +++  + Wk+I + +g ++t  q++s+ qky
   XP_026404003.1 51 RESWTEQEHDKFLEALQLFDRD-WKKIEAFIG-TKTVIQIRSHAQKY 95
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MVSSKPGETG FYLDPSSMGV TATQTTIATP TSSSEDLSKK IRKSYTITKS RESWTEQEHD  60
KFLEALQLFD RDWKKIEAFI GTKTVIQIRS HAQKYFLKVQ KNGTSEHVPP PRPKRKAAHP  120
YPQKASKNVL VSPQGMGPCH ASVPFPEPGY IVRPDSSSMP TNSNANPALS SWHHNSAPLM  180
DASRITQDNM GSGRPTTVNN CCSSSESTPR KWAASEMADH GPPLKVMPDF SQVYRFIGSV  240
FDPETTGHLR KLKEMDPIDV ETVLLLMRNL TVNLLSPDFE DHRKLLKSYD ADLEKTKSEG  300
ASITTPPVQV GRRIKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.28e-80MYB_related family protein