PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026404185.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

LBD

Protein Properties

Length: 209aa MW: 23767.2 Da PI: 7.7897

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026404185.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	128.2	3.7e-40	6	105	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk lrr+Ca+dCvlapyfp+++p++f vhk+FGasn++k+l++lp ++r++a++++ eA +r++dPvyG+vg+i++lqqq+ +++ela XP_026404185.1 6 RCAACKSLRRRCAEDCVLAPYFPSTNPQRFSSVHKIFGASNITKMLQRLPVSQRSEAADCMSLEATWRVQDPVYGCVGIISQLQQQILMVQSELA 100 6********************************************************************************************** PP DUF260 96 llkee 100 +++ e XP_026404185.1 101 KTQGE 105 99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 209 aa Download sequence
MSNSTRCAAC KSLRRRCAED CVLAPYFPST NPQRFSSVHK IFGASNITKM LQRLPVSQRS 60 EAADCMSLEA TWRVQDPVYG CVGIISQLQQ QILMVQSELA KTQGEIAFHN AQQQQQQTQL 120 PQEPIVGGTQ SLFQFGQPSS SSTNINVNQE DMISSNLDQQ PFLDFLNQQR LLFPSSTHIC 180 GHHFLLFVDY VLLFLLKHLF FIFFFILTR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26620.1	7e-45	LBD family protein