PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026404536.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HB-other

Protein Properties

Length: 1253aa MW: 140828 Da PI: 9.0009

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026404536.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	32.9	1.1e-10	23	73	7	57
--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 7 ftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 ++ qle Le+++ +++ p++e+ e+ A l+Lt +qV+ WF +R ++kk XP_026404536.1 23 KSPFQLESLENFYSEEPFPTQETLEDYAFVLNLTYKQVRGWFAEKRRRDKK 73 5789*********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1253 aa Download sequence
MGNDDMVTTS EQDNGIINHN RRKSPFQLES LENFYSEEPF PTQETLEDYA FVLNLTYKQV 60 RGWFAEKRRR DKKGREGVEL PSKKSMKGSC IKTGRCPAKK RNLRDCVSKK PNAHLSTKTS 120 RSKIFKKDAG KSKCSNIRNH GEERLIDFFG KKNKSNQKKR KLSYIQDILP PDYLLEKVFR 180 KDGPPLGVEF DSLPLGAFSH SAVTDACSFR STCADNQRAP KRRKVSKSLI LQQEACKNKS 240 VLVKHGIGKG LVLRHGIGKG LMLRHDMGEA LMMRHGMGKG LMMKHGIGKG LMMRHGMGKG 300 LMTARHAVNP NNIDIFSTDG RITVRKGNNL KLLKSQEATL QKTRKSVHQK LAEKQKNLRN 360 KVQERRKRVV RKPKMQSRKN GNSNKSHQEE CKLCSGELRD EDTSSAFATS LDDEELELRE 420 LQEGPNPPMC SANLASNGIH SCSLCKDLLP RFPPIAVKMN LPFQMQPWVS STELVKKLFK 480 AIRFLYTHAV TVDMSPFTLD EFAQAFHDKD SLLLGEMHVA LLKRLLSDVE VQLSSGLYSH 540 ASKDSRFLAF LHYAKDQELR VKFWNRSLNP LTWTEILRQV LIGAGFGSKQ SVLRKKQLEK 600 EGNVMIKYGL FPGTMKGELF SILSEQGNNG LKVPELANLL QISDLNLAET IDELEVQIYS 660 TLSRDISLFE KISPSAYRVR NNPPSTELAG ESDSEDSKSV DADDSGDSIT SNSSDDDSEI 720 DSGTSSLSIV KYKGHRKRKN STVVANTEID ESHPGEMWVL GLMEGEYSDL SIEEKLDALV 780 ALVDLANAGS SQRVEDPSRI TTERVPIVNH QGGGKIKRSS AAQLNVGNSF QGCISVDPLT 840 TMSYHFGMEY PSCKGKRLCR KDGRYTSEAM RVDAMELNGH PLLSVYLGSD RRYNCYWLFL 900 GPCNVKDPGH RRIYFESSED GHWEVIDTEE ALCALLSILD SRGTREARLV ASLEKREALL 960 SQSMSAAKIA DKDINEQRQC DQSSPDTHSG EGSSPISDID NSQILGEALN DSRSSSHSVI 1020 SHYVKKKEDQ KQKWDRLQAF DAWIWNSFYT NLNAVKYSKR SYLDSLAHCD SCHDLYWRDE 1080 KHCQVCHITF ELDFDLEERY AIHAATCTAK ESHIFPKHKV LSSQLQSLKA AIHAIEAVMP 1140 PGALVSSWTV STHQLWVNRL RRTSSVAELF QVLSDFTGAI DENWLCQCSG DLGSKLVLDE 1200 IVALFPTMPQ TTSAIALWLA KLDTLLAPYL EKVNSGKAQA KQNTRQTRRS ALR

Sequence ? help Back to Top

Protein Sequence Length: 1253 aa Download sequence

MGNDDMVTTS EQDNGIINHN RRKSPFQLES LENFYSEEPF PTQETLEDYA FVLNLTYKQV  60
RGWFAEKRRR DKKGREGVEL PSKKSMKGSC IKTGRCPAKK RNLRDCVSKK PNAHLSTKTS  120
RSKIFKKDAG KSKCSNIRNH GEERLIDFFG KKNKSNQKKR KLSYIQDILP PDYLLEKVFR  180
KDGPPLGVEF DSLPLGAFSH SAVTDACSFR STCADNQRAP KRRKVSKSLI LQQEACKNKS  240
VLVKHGIGKG LVLRHGIGKG LMLRHDMGEA LMMRHGMGKG LMMKHGIGKG LMMRHGMGKG  300
LMTARHAVNP NNIDIFSTDG RITVRKGNNL KLLKSQEATL QKTRKSVHQK LAEKQKNLRN  360
KVQERRKRVV RKPKMQSRKN GNSNKSHQEE CKLCSGELRD EDTSSAFATS LDDEELELRE  420
LQEGPNPPMC SANLASNGIH SCSLCKDLLP RFPPIAVKMN LPFQMQPWVS STELVKKLFK  480
AIRFLYTHAV TVDMSPFTLD EFAQAFHDKD SLLLGEMHVA LLKRLLSDVE VQLSSGLYSH  540
ASKDSRFLAF LHYAKDQELR VKFWNRSLNP LTWTEILRQV LIGAGFGSKQ SVLRKKQLEK  600
EGNVMIKYGL FPGTMKGELF SILSEQGNNG LKVPELANLL QISDLNLAET IDELEVQIYS  660
TLSRDISLFE KISPSAYRVR NNPPSTELAG ESDSEDSKSV DADDSGDSIT SNSSDDDSEI  720
DSGTSSLSIV KYKGHRKRKN STVVANTEID ESHPGEMWVL GLMEGEYSDL SIEEKLDALV  780
ALVDLANAGS SQRVEDPSRI TTERVPIVNH QGGGKIKRSS AAQLNVGNSF QGCISVDPLT  840
TMSYHFGMEY PSCKGKRLCR KDGRYTSEAM RVDAMELNGH PLLSVYLGSD RRYNCYWLFL  900
GPCNVKDPGH RRIYFESSED GHWEVIDTEE ALCALLSILD SRGTREARLV ASLEKREALL  960
SQSMSAAKIA DKDINEQRQC DQSSPDTHSG EGSSPISDID NSQILGEALN DSRSSSHSVI  1020
SHYVKKKEDQ KQKWDRLQAF DAWIWNSFYT NLNAVKYSKR SYLDSLAHCD SCHDLYWRDE  1080
KHCQVCHITF ELDFDLEERY AIHAATCTAK ESHIFPKHKV LSSQLQSLKA AIHAIEAVMP  1140
PGALVSSWTV STHQLWVNRL RRTSSVAELF QVLSDFTGAI DENWLCQCSG DLGSKLVLDE  1200
IVALFPTMPQ TTSAIALWLA KLDTLLAPYL EKVNSGKAQA KQNTRQTRRS ALR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	67	87	KRRRDKKGREGVELPSKKSMK
2	218	223	RAPKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	0.0	HB-other family protein