PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026404537.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HB-other

Protein Properties

Length: 1244aa MW: 139831 Da PI: 8.9506

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026404537.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	32.9	1.1e-10	23	73	7	57
--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 7 ftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 ++ qle Le+++ +++ p++e+ e+ A l+Lt +qV+ WF +R ++kk XP_026404537.1 23 KSPFQLESLENFYSEEPFPTQETLEDYAFVLNLTYKQVRGWFAEKRRRDKK 73 5789*********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1244 aa Download sequence
MGNDDMVTTS EQDNGIINHN RRKSPFQLES LENFYSEEPF PTQETLEDYA FVLNLTYKQV 60 RGWFAEKRRR DKKGREGVEL PSKKSMKGSC IKTGRCPAKK RNLRDCVSKK PNAHLSTKTS 120 RSKIFKKDAG KSKCSNIRNH GEERLIDFFG KKNKSNQKKR KLSYIQDILP PDYLLEKVFR 180 KDGPPLGVEF DSLPLGAFSH SAVTDACSFR STCADNQRAP KRRKEACKNK SVLVKHGIGK 240 GLVLRHGIGK GLMLRHDMGE ALMMRHGMGK GLMMKHGIGK GLMMRHGMGK GLMTARHAVN 300 PNNIDIFSTD GRITVRKGNN LKLLKSQEAT LQKTRKSVHQ KLAEKQKNLR NKVQERRKRV 360 VRKPKMQSRK NGNSNKSHQE ECKLCSGELR DEDTSSAFAT SLDDEELELR ELQEGPNPPM 420 CSANLASNGI HSCSLCKDLL PRFPPIAVKM NLPFQMQPWV SSTELVKKLF KAIRFLYTHA 480 VTVDMSPFTL DEFAQAFHDK DSLLLGEMHV ALLKRLLSDV EVQLSSGLYS HASKDSRFLA 540 FLHYAKDQEL RVKFWNRSLN PLTWTEILRQ VLIGAGFGSK QSVLRKKQLE KEGNVMIKYG 600 LFPGTMKGEL FSILSEQGNN GLKVPELANL LQISDLNLAE TIDELEVQIY STLSRDISLF 660 EKISPSAYRV RNNPPSTELA GESDSEDSKS VDADDSGDSI TSNSSDDDSE IDSGTSSLSI 720 VKYKGHRKRK NSTVVANTEI DESHPGEMWV LGLMEGEYSD LSIEEKLDAL VALVDLANAG 780 SSQRVEDPSR ITTERVPIVN HQGGGKIKRS SAAQLNVGNS FQGCISVDPL TTMSYHFGME 840 YPSCKGKRLC RKDGRYTSEA MRVDAMELNG HPLLSVYLGS DRRYNCYWLF LGPCNVKDPG 900 HRRIYFESSE DGHWEVIDTE EALCALLSIL DSRGTREARL VASLEKREAL LSQSMSAAKI 960 ADKDINEQRQ CDQSSPDTHS GEGSSPISDI DNSQILGEAL NDSRSSSHSV ISHYVKKKED 1020 QKQKWDRLQA FDAWIWNSFY TNLNAVKYSK RSYLDSLAHC DSCHDLYWRD EKHCQVCHIT 1080 FELDFDLEER YAIHAATCTA KESHIFPKHK VLSSQLQSLK AAIHAIEAVM PPGALVSSWT 1140 VSTHQLWVNR LRRTSSVAEL FQVLSDFTGA IDENWLCQCS GDLGSKLVLD EIVALFPTMP 1200 QTTSAIALWL AKLDTLLAPY LEKVNSGKAQ AKQNTRQTRR SALR

Sequence ? help Back to Top

Protein Sequence Length: 1244 aa Download sequence

MGNDDMVTTS EQDNGIINHN RRKSPFQLES LENFYSEEPF PTQETLEDYA FVLNLTYKQV  60
RGWFAEKRRR DKKGREGVEL PSKKSMKGSC IKTGRCPAKK RNLRDCVSKK PNAHLSTKTS  120
RSKIFKKDAG KSKCSNIRNH GEERLIDFFG KKNKSNQKKR KLSYIQDILP PDYLLEKVFR  180
KDGPPLGVEF DSLPLGAFSH SAVTDACSFR STCADNQRAP KRRKEACKNK SVLVKHGIGK  240
GLVLRHGIGK GLMLRHDMGE ALMMRHGMGK GLMMKHGIGK GLMMRHGMGK GLMTARHAVN  300
PNNIDIFSTD GRITVRKGNN LKLLKSQEAT LQKTRKSVHQ KLAEKQKNLR NKVQERRKRV  360
VRKPKMQSRK NGNSNKSHQE ECKLCSGELR DEDTSSAFAT SLDDEELELR ELQEGPNPPM  420
CSANLASNGI HSCSLCKDLL PRFPPIAVKM NLPFQMQPWV SSTELVKKLF KAIRFLYTHA  480
VTVDMSPFTL DEFAQAFHDK DSLLLGEMHV ALLKRLLSDV EVQLSSGLYS HASKDSRFLA  540
FLHYAKDQEL RVKFWNRSLN PLTWTEILRQ VLIGAGFGSK QSVLRKKQLE KEGNVMIKYG  600
LFPGTMKGEL FSILSEQGNN GLKVPELANL LQISDLNLAE TIDELEVQIY STLSRDISLF  660
EKISPSAYRV RNNPPSTELA GESDSEDSKS VDADDSGDSI TSNSSDDDSE IDSGTSSLSI  720
VKYKGHRKRK NSTVVANTEI DESHPGEMWV LGLMEGEYSD LSIEEKLDAL VALVDLANAG  780
SSQRVEDPSR ITTERVPIVN HQGGGKIKRS SAAQLNVGNS FQGCISVDPL TTMSYHFGME  840
YPSCKGKRLC RKDGRYTSEA MRVDAMELNG HPLLSVYLGS DRRYNCYWLF LGPCNVKDPG  900
HRRIYFESSE DGHWEVIDTE EALCALLSIL DSRGTREARL VASLEKREAL LSQSMSAAKI  960
ADKDINEQRQ CDQSSPDTHS GEGSSPISDI DNSQILGEAL NDSRSSSHSV ISHYVKKKED  1020
QKQKWDRLQA FDAWIWNSFY TNLNAVKYSK RSYLDSLAHC DSCHDLYWRD EKHCQVCHIT  1080
FELDFDLEER YAIHAATCTA KESHIFPKHK VLSSQLQSLK AAIHAIEAVM PPGALVSSWT  1140
VSTHQLWVNR LRRTSSVAEL FQVLSDFTGA IDENWLCQCS GDLGSKLVLD EIVALFPTMP  1200
QTTSAIALWL AKLDTLLAPY LEKVNSGKAQ AKQNTRQTRR SALR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	67	87	KRRRDKKGREGVELPSKKSMK
2	218	223	RAPKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	0.0	HB-other family protein