PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026404943.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family ARR-B
Protein Properties Length: 714aa    MW: 78642 Da    PI: 6.0506
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026404943.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like89.23.7e-28216269155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     kpr++W+ eLH++Fv av+qL G++kA+Pk+il+lm+v+ Lt+e+v+SHLQkYRl
  XP_026404943.1 216 KPRVVWSVELHRKFVAAVNQL-GIDKAVPKKILDLMNVDRLTRENVASHLQKYRL 269
                     79*******************.********************************8 PP
2Myb_DNA-binding37.94.1e-12218268148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W+ e++ ++v av+qlG +   +k+I   m+  ++t++++ s++qky+
   XP_026404943.1 218 RVVWSVELHRKFVAAVNQLGIDkaVPKKILDLMNvDRLTRENVASHLQKYR 268
                      678***********************************************7 PP
3Response_reg76.69e-26321401109
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     vl vdD+ + +++l+++l++ +y +v++++++  al++l+e++  +Dl++ D++mp+mdG++ll+     e++lp+i+++a+g+   + + +  G
  XP_026404943.1  32 VLAVDDDLICLRVLESLLRRCQY-HVTTTTQAVTALKMLRENRdkFDLVISDVQMPDMDGFKLLELVGL-EMDLPVIMLSANGDTRNVMRGITHG 124
                     799********************.***************999889*******************87754.558********************** PP

                     ESEEEESS--HHHHHH CS
    Response_reg  94 akdflsKpfdpeelvk 109
                     a d+l Kp+ +eel +
  XP_026404943.1 125 ACDYLLKPVRIEELKN 140
                     *************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 714 aa     Download sequence    
MTVEEEFVRR RSSSILCEDE QKNDLFPIGM RVLAVDDDLI CLRVLESLLR RCQYHVTTTT  60
QAVTALKMLR ENRDKFDLVI SDVQMPDMDG FKLLELVGLE MDLPVIMLSA NGDTRNVMRG  120
ITHGACDYLL KPVRIEELKN IWQHVLRKKK VDPKDQNNLD NSDKLDSGMG DSGKGPENFG  180
NDDRTKLNRK RKDQNEEDDD ECDDDDENDD PSSQKKPRVV WSVELHRKFV AAVNQLGIDK  240
AVPKKILDLM NVDRLTRENV ASHLQKYRLY LKRISCVASQ QANMVAALGG KDASYLRMGS  300
LDGLGDFHGF AGPGQLSNGS LASYSSAGML GRSNAPLGLG LRGPSSGMMQ LGRPQNLTNS  360
VHDLGKLHQN GNFLQGMPMS LELDQLQKSR SISRIGEFSS SIDSTAFSGP SNFSETGVTI  420
GNSNNSFLNV HSNSLLLQGV PQQTQNRVGF GNQSSRRMPS VNSESFEFEF GASSHLPDQS  480
GCNDNWPSAA ALNGFPSNPL PLGENPFSHL DLSSGSLREN MSSINPSIGS NSFDVSSNSV  540
TTLHESRRDL QAGPIGVNVQ HDKFSNFVNL GDNVGQSMNL VPKHKWISHK QDYSQNSNLL  600
FSSSNPSVPI HGVVGALGQN NNTMSNRKTD FISTSRPNSG STPHLTRQNG IEKLSLDMTE  660
NFLLDQNKSH GGVVSNSCDS LEDLMSAMIK RERDELTSRD GDIGCDIFPV RTCM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-128ARR-B family protein