PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026405351.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 723aa MW: 80263.9 Da PI: 4.8717

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026405351.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	48.1	2.1e-15	33	123	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 ffk++ s +l +p +a+++ ++ ++led g++W+vkl k +g+ ++kGW++Fv ++ +k gDf+vF++ ++ f v XP_026405351.1 33 FFKIM--LGDRFSTLLFIPPVYARSIaT-L--DNQVIILEDAMGEQWKVKL--AKVDGSLAISKGWNDFVIDHSIKLGDFLVFSYLADTFF--QV 118 56666..444455679********53.3..3458***********..*****************************9987777..99 PP EEE-S CS B3 95 kvfrk 99 ++f++ XP_026405351.1 119 QIFES 123 99875 PP
2	B3	41.2	3e-13	653	720	27	96
---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 27 ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 g k+ +++ ++l+d+s r+W v + + +s+ vl++GWk ++an+L+ gD+++ ++++ se+ l + + XP_026405351.1 653 GRKPSGKRIVVLRDSSMRKWPVVY--QERSSFRVLASGWKALAEANNLQKGDICLMSVENASEGLLQLEI 720 4556677889************..9999999*********************98776777566555 PP

Sequence ? help Back to Top
Protein Sequence Length: 723 aa Download sequence
MGSGVVEACE KCSKKCVMIH QGRKDPSSIV TPFFKIMLGD RFSTLLFIPP VYARSIATLD 60 NQVIILEDAM GEQWKVKLAK VDGSLAISKG WNDFVIDHSI KLGDFLVFSY LADTFFQVQI 120 FESTGCEKLS FSAKTTNNFN NNTNCTATNN NGGKRVKGKR SFGDASRDRT NSSSSKFPAG 180 TAGNCSVHEQ GSNSTIHSRF DDEMRERRKS ANDTANVKMA AEKASDNHNK EKTLQPATQV 240 ECTEVPFYMF DRSSDKQGTS TSPLFDLSNF ERPITESGMN AAQKTAPVAL EKATSSHPST 300 DHEMEEQNHV FDEEAVCKNR GNSGLSVGIP VTEVLNSVND LEMFERNFYV ENQDKVPVLA 360 DATEEMLALV DIPSVEVPNG VYDLEMPEGN CNSENQDEVQ VHANATEERE GFVLELDGLE 420 MREQYHVVDE KPGKNGENNV PPVDIPAVEV RDSAHDFELP ERKDNAENED KIPLAADELA 480 GYCNVIKQPL STPAVGFCES ERENLKISNA ASFKEPLLVD ELNAVVPDVV LLGDHRPQES 540 SRRVTRFSSS LPPGSSKNPV AMEVKDHQTV KVSKVVEKER EKKLKEKQGR HTTFVKAEPE 600 EFEYEACTAV KTENIDYNSP LSLDAVNFST SAPAETQSYL ELALDLPWFA VRGRKPSGKR 660 IVVLRDSSMR KWPVVYQERS SFRVLASGWK ALAEANNLQK GDICLMSVEN ASEGLLQLEI 720 KRK

Sequence ? help Back to Top

Protein Sequence Length: 723 aa Download sequence

MGSGVVEACE KCSKKCVMIH QGRKDPSSIV TPFFKIMLGD RFSTLLFIPP VYARSIATLD  60
NQVIILEDAM GEQWKVKLAK VDGSLAISKG WNDFVIDHSI KLGDFLVFSY LADTFFQVQI  120
FESTGCEKLS FSAKTTNNFN NNTNCTATNN NGGKRVKGKR SFGDASRDRT NSSSSKFPAG  180
TAGNCSVHEQ GSNSTIHSRF DDEMRERRKS ANDTANVKMA AEKASDNHNK EKTLQPATQV  240
ECTEVPFYMF DRSSDKQGTS TSPLFDLSNF ERPITESGMN AAQKTAPVAL EKATSSHPST  300
DHEMEEQNHV FDEEAVCKNR GNSGLSVGIP VTEVLNSVND LEMFERNFYV ENQDKVPVLA  360
DATEEMLALV DIPSVEVPNG VYDLEMPEGN CNSENQDEVQ VHANATEERE GFVLELDGLE  420
MREQYHVVDE KPGKNGENNV PPVDIPAVEV RDSAHDFELP ERKDNAENED KIPLAADELA  480
GYCNVIKQPL STPAVGFCES ERENLKISNA ASFKEPLLVD ELNAVVPDVV LLGDHRPQES  540
SRRVTRFSSS LPPGSSKNPV AMEVKDHQTV KVSKVVEKER EKKLKEKQGR HTTFVKAEPE  600
EFEYEACTAV KTENIDYNSP LSLDAVNFST SAPAETQSYL ELALDLPWFA VRGRKPSGKR  660
IVVLRDSSMR KWPVVYQERS SFRVLASGWK ALAEANNLQK GDICLMSVEN ASEGLLQLEI  720
KRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18960.1	6e-14	B3 family protein