PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026405504.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 1187aa MW: 133146 Da PI: 9.4405

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026405504.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.2	1.6e-07	47	82	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W+ e+ +++++a++++ ++ Wk++a + +R+++++ XP_026405504.1 47 QWSNEDLKRFYEAFRKYDKD-WKKVAGAVR-NRSAEMV 82 6***************99.*****.*9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 1187 aa Download sequence
MATRKYRSIN NKQFGKLNEE SPDIDGGSGG NKSRQRKRKL TDMLGPQWSN EDLKRFYEAF 60 RKYDKDWKKV AGAVRNRSAE MVEALYHMNR AYLSLPVEKA SVAGLTAMMT DHYSMLHGSE 120 SDRESDDAPG VSQKPAKRAR AKYQVNGSKG TDANVPDFLK LPPVSSNNGC FSVKKRRTIG 180 GRHAVGKRTP RYPVSHTSDK HESEKFVTPN KRGLKSDLDE HDEEVSHGEV LTLAEALQRA 240 ASPQVSDTPK RRSEHLRPPS SRKSERRKQF DWEKSSTKHR VITDENYLED SLGSGETENG 300 DFYRNSSYMM DARGVGTVGV QKKANKSLGR KPNRDEDWEA CSGTNEGLNL SYVKEQPENE 360 VTDSRYGRPR KKNKHLKEDV KQALDGLTLL ANMSLKIGQA SADGSESSVQ FKEERGRGSR 420 GHLDNFSRHE TFSTNRQRDK SNFSGVKEKS LREVEVTTSK SSRSTKVSTF DVNFLTEEKK 480 PRSQTTIKMQ KLKRKHLASK MQSPTNESNT DLLPDEREQT EALEEYVKRS TMKAKRVGPA 540 AVVPKQGNSF KPPELTSSNA DPVRPGTDAA LSTEKVPTPS QVFLPTKYTS RRKMNLQKAL 600 IHRVSNFFED LGNKRPGKHT SQDGTLDIKE KLCRCLSSPM LRRWCAFEWF YNAIDYPWFA 660 KKEFVEYLNH VRLGHVPRLT RAEWGVIRSS LGKPRRLSQQ FLREEKEKLE QYRESVRTHY 720 TELRNGTRDG LPTDLARPLS VGQRVIACHP RTREFHDGSV LTVDRNRCRV QFDRHELGVE 780 FVMDIDCMPL NALENMPEAL RRQNIAAGRL SENLNDPKLN NQSKDKTTGG YKSIAPCAKL 840 ETTDVSSQIS SPIYPTNTLI KKAEGDTVSD IAEAKAAANE MKAAYTQPCS LAQLQAREAD 900 TRALSELSRA LEKKEALVSE LSRMNDEVQE NQIYGENSLK DYDPFKKQYA KVLIQLKDGN 960 DQVSSDLIYL RKRNTYQGDS PPWQTSKPGS GVPVGPFNSI DASGFLPQEA ASHVVGILES 1020 SRVKAQTMVD VAVQELLSCK DGEDAFGSIG EALDSASTHK NGTEVRSFTS TDPINGGSFH 1080 YQDAATNSHI SKPVTAVYSN GITQNNSTFD ANEVQIPKDL ISSCLATLLM VQTCTEERQY 1140 PPAEVAQILD SAFTSLHPCC SQNLPIYQDI RLCMGLVKNQ ILALIPT

Sequence ? help Back to Top

Protein Sequence Length: 1187 aa Download sequence

MATRKYRSIN NKQFGKLNEE SPDIDGGSGG NKSRQRKRKL TDMLGPQWSN EDLKRFYEAF  60
RKYDKDWKKV AGAVRNRSAE MVEALYHMNR AYLSLPVEKA SVAGLTAMMT DHYSMLHGSE  120
SDRESDDAPG VSQKPAKRAR AKYQVNGSKG TDANVPDFLK LPPVSSNNGC FSVKKRRTIG  180
GRHAVGKRTP RYPVSHTSDK HESEKFVTPN KRGLKSDLDE HDEEVSHGEV LTLAEALQRA  240
ASPQVSDTPK RRSEHLRPPS SRKSERRKQF DWEKSSTKHR VITDENYLED SLGSGETENG  300
DFYRNSSYMM DARGVGTVGV QKKANKSLGR KPNRDEDWEA CSGTNEGLNL SYVKEQPENE  360
VTDSRYGRPR KKNKHLKEDV KQALDGLTLL ANMSLKIGQA SADGSESSVQ FKEERGRGSR  420
GHLDNFSRHE TFSTNRQRDK SNFSGVKEKS LREVEVTTSK SSRSTKVSTF DVNFLTEEKK  480
PRSQTTIKMQ KLKRKHLASK MQSPTNESNT DLLPDEREQT EALEEYVKRS TMKAKRVGPA  540
AVVPKQGNSF KPPELTSSNA DPVRPGTDAA LSTEKVPTPS QVFLPTKYTS RRKMNLQKAL  600
IHRVSNFFED LGNKRPGKHT SQDGTLDIKE KLCRCLSSPM LRRWCAFEWF YNAIDYPWFA  660
KKEFVEYLNH VRLGHVPRLT RAEWGVIRSS LGKPRRLSQQ FLREEKEKLE QYRESVRTHY  720
TELRNGTRDG LPTDLARPLS VGQRVIACHP RTREFHDGSV LTVDRNRCRV QFDRHELGVE  780
FVMDIDCMPL NALENMPEAL RRQNIAAGRL SENLNDPKLN NQSKDKTTGG YKSIAPCAKL  840
ETTDVSSQIS SPIYPTNTLI KKAEGDTVSD IAEAKAAANE MKAAYTQPCS LAQLQAREAD  900
TRALSELSRA LEKKEALVSE LSRMNDEVQE NQIYGENSLK DYDPFKKQYA KVLIQLKDGN  960
DQVSSDLIYL RKRNTYQGDS PPWQTSKPGS GVPVGPFNSI DASGFLPQEA ASHVVGILES  1020
SRVKAQTMVD VAVQELLSCK DGEDAFGSIG EALDSASTHK NGTEVRSFTS TDPINGGSFH  1080
YQDAATNSHI SKPVTAVYSN GITQNNSTFD ANEVQIPKDL ISSCLATLLM VQTCTEERQY  1140
PPAEVAQILD SAFTSLHPCC SQNLPIYQDI RLCMGLVKNQ ILALIPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	479	495	KKPRSQTTIKMQKLKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein