PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026405505.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 1185aa MW: 132887 Da PI: 9.4405

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026405505.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.2	1.6e-07	47	82	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W+ e+ +++++a++++ ++ Wk++a + +R+++++ XP_026405505.1 47 QWSNEDLKRFYEAFRKYDKD-WKKVAGAVR-NRSAEMV 82 6***************99.*****.*9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 1185 aa Download sequence
MATRKYRSIN NKQFGKLNEE SPDIDGGSGG NKSRQRKRKL TDMLGPQWSN EDLKRFYEAF 60 RKYDKDWKKV AGAVRNRSAE MVEALYHMNR AYLSLPVEKA SVAGLTAMMT DHYSMLHGSE 120 SDRESDDAPG VSQKPAKRAR AKYQVNGSKG TDANVPDFLK LPPVSSNNGC FSVKKRRTIG 180 GRHAVGKRTP RYPVSHTSDK HESEKFVTPN KRGLKSDLDE HDEEVSHGEV LTLAEALQRA 240 ASPQVSDTPK RRSEHLRPPS SRKSERRKQF DWEKSSTKHR VITDENYLED SLGSGETENG 300 DFYRNSSYMM DARGVGTVGV QKKANKSLGR KPNRDEDWEA CSGTNEGLNL SYVKEQPENE 360 VTDSRYGRPR KKNKHLKEDV KQALDGLTLL ANMSLKIGQA SADGSESSVQ FKEERGRGSR 420 GHLDNFSRHE TFSTNRQRDK SNFSGVKEKS LREVEVTTSK SSRSTKVSTF DVNFLTEEKK 480 PRSQTTIKMQ KLKRKHLASK SPTNESNTDL LPDEREQTEA LEEYVKRSTM KAKRVGPAAV 540 VPKQGNSFKP PELTSSNADP VRPGTDAALS TEKVPTPSQV FLPTKYTSRR KMNLQKALIH 600 RVSNFFEDLG NKRPGKHTSQ DGTLDIKEKL CRCLSSPMLR RWCAFEWFYN AIDYPWFAKK 660 EFVEYLNHVR LGHVPRLTRA EWGVIRSSLG KPRRLSQQFL REEKEKLEQY RESVRTHYTE 720 LRNGTRDGLP TDLARPLSVG QRVIACHPRT REFHDGSVLT VDRNRCRVQF DRHELGVEFV 780 MDIDCMPLNA LENMPEALRR QNIAAGRLSE NLNDPKLNNQ SKDKTTGGYK SIAPCAKLET 840 TDVSSQISSP IYPTNTLIKK AEGDTVSDIA EAKAAANEMK AAYTQPCSLA QLQAREADTR 900 ALSELSRALE KKEALVSELS RMNDEVQENQ IYGENSLKDY DPFKKQYAKV LIQLKDGNDQ 960 VSSDLIYLRK RNTYQGDSPP WQTSKPGSGV PVGPFNSIDA SGFLPQEAAS HVVGILESSR 1020 VKAQTMVDVA VQELLSCKDG EDAFGSIGEA LDSASTHKNG TEVRSFTSTD PINGGSFHYQ 1080 DAATNSHISK PVTAVYSNGI TQNNSTFDAN EVQIPKDLIS SCLATLLMVQ TCTEERQYPP 1140 AEVAQILDSA FTSLHPCCSQ NLPIYQDIRL CMGLVKNQIL ALIPT

Sequence ? help Back to Top

Protein Sequence Length: 1185 aa Download sequence

MATRKYRSIN NKQFGKLNEE SPDIDGGSGG NKSRQRKRKL TDMLGPQWSN EDLKRFYEAF  60
RKYDKDWKKV AGAVRNRSAE MVEALYHMNR AYLSLPVEKA SVAGLTAMMT DHYSMLHGSE  120
SDRESDDAPG VSQKPAKRAR AKYQVNGSKG TDANVPDFLK LPPVSSNNGC FSVKKRRTIG  180
GRHAVGKRTP RYPVSHTSDK HESEKFVTPN KRGLKSDLDE HDEEVSHGEV LTLAEALQRA  240
ASPQVSDTPK RRSEHLRPPS SRKSERRKQF DWEKSSTKHR VITDENYLED SLGSGETENG  300
DFYRNSSYMM DARGVGTVGV QKKANKSLGR KPNRDEDWEA CSGTNEGLNL SYVKEQPENE  360
VTDSRYGRPR KKNKHLKEDV KQALDGLTLL ANMSLKIGQA SADGSESSVQ FKEERGRGSR  420
GHLDNFSRHE TFSTNRQRDK SNFSGVKEKS LREVEVTTSK SSRSTKVSTF DVNFLTEEKK  480
PRSQTTIKMQ KLKRKHLASK SPTNESNTDL LPDEREQTEA LEEYVKRSTM KAKRVGPAAV  540
VPKQGNSFKP PELTSSNADP VRPGTDAALS TEKVPTPSQV FLPTKYTSRR KMNLQKALIH  600
RVSNFFEDLG NKRPGKHTSQ DGTLDIKEKL CRCLSSPMLR RWCAFEWFYN AIDYPWFAKK  660
EFVEYLNHVR LGHVPRLTRA EWGVIRSSLG KPRRLSQQFL REEKEKLEQY RESVRTHYTE  720
LRNGTRDGLP TDLARPLSVG QRVIACHPRT REFHDGSVLT VDRNRCRVQF DRHELGVEFV  780
MDIDCMPLNA LENMPEALRR QNIAAGRLSE NLNDPKLNNQ SKDKTTGGYK SIAPCAKLET  840
TDVSSQISSP IYPTNTLIKK AEGDTVSDIA EAKAAANEMK AAYTQPCSLA QLQAREADTR  900
ALSELSRALE KKEALVSELS RMNDEVQENQ IYGENSLKDY DPFKKQYAKV LIQLKDGNDQ  960
VSSDLIYLRK RNTYQGDSPP WQTSKPGSGV PVGPFNSIDA SGFLPQEAAS HVVGILESSR  1020
VKAQTMVDVA VQELLSCKDG EDAFGSIGEA LDSASTHKNG TEVRSFTSTD PINGGSFHYQ  1080
DAATNSHISK PVTAVYSNGI TQNNSTFDAN EVQIPKDLIS SCLATLLMVQ TCTEERQYPP  1140
AEVAQILDSA FTSLHPCCSQ NLPIYQDIRL CMGLVKNQIL ALIPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	479	495	KKPRSQTTIKMQKLKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein