PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026405507.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 1158aa MW: 129876 Da PI: 9.3089

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026405507.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.2	1.6e-07	47	82	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W+ e+ +++++a++++ ++ Wk++a + +R+++++ XP_026405507.1 47 QWSNEDLKRFYEAFRKYDKD-WKKVAGAVR-NRSAEMV 82 6***************99.*****.*9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 1158 aa Download sequence
MATRKYRSIN NKQFGKLNEE SPDIDGGSGG NKSRQRKRKL TDMLGPQWSN EDLKRFYEAF 60 RKYDKDWKKV AGAVRNRSAE MVEALYHMNR AYLSLPVEKA SVAGLTAMMT DHYSMLHGSE 120 SDRESDDAPG VSQKPAKRAR AKYQVNGSKG TDANVPDFLK LPPVSSNNGC FSVKKRRTIG 180 GRHAVGKRTP RYPVSHTSDK HESEKFVTPN KRGLKSDLDE HDEEVSHGEV LTLAEALQRA 240 ASPQVSDTPK RRSEHLRPPS SRKSERRKQF DWEKSSTKHR VITDENYLED SLGSGETENG 300 DFYRNSSYMM DARGVGTVGV QKKANKSLGR KPNRDEDWEA CSGTNEGLNL SYVKEQPENE 360 VTDSRYGRPR KKNKHLKEDV KQALDGLTLL ANMSLKIGQA SADGSESSVQ FKEERGRGSR 420 GHLDNFSRHE TFSTNRQRDK SNFSGVKEKS LREVETTIKM QKLKRKHLAS KMQSPTNESN 480 TDLLPDEREQ TEALEEYVKR STMKAKRVGP AAVVPKQGNS FKPPELTSSN ADPVRPGTDA 540 ALSTEKVPTP SQVFLPTKYT SRRKMNLQKA LIHRVSNFFE DLGNKRPGKH TSQDGTLDIK 600 EKLCRCLSSP MLRRWCAFEW FYNAIDYPWF AKKEFVEYLN HVRLGHVPRL TRAEWGVIRS 660 SLGKPRRLSQ QFLREEKEKL EQYRESVRTH YTELRNGTRD GLPTDLARPL SVGQRVIACH 720 PRTREFHDGS VLTVDRNRCR VQFDRHELGV EFVMDIDCMP LNALENMPEA LRRQNIAAGR 780 LSENLNDPKL NNQSKDKTTG GYKSIAPCAK LETTDVSSQI SSPIYPTNTL IKKAEGDTVS 840 DIAEAKAAAN EMKAAYTQPC SLAQLQAREA DTRALSELSR ALEKKEALVS ELSRMNDEVQ 900 ENQIYGENSL KDYDPFKKQY AKVLIQLKDG NDQVSSDLIY LRKRNTYQGD SPPWQTSKPG 960 SGVPVGPFNS IDASGFLPQE AASHVVGILE SSRVKAQTMV DVAVQELLSC KDGEDAFGSI 1020 GEALDSASTH KNGTEVRSFT STDPINGGSF HYQDAATNSH ISKPVTAVYS NGITQNNSTF 1080 DANEVQIPKD LISSCLATLL MVQTCTEERQ YPPAEVAQIL DSAFTSLHPC CSQNLPIYQD 1140 IRLCMGLVKN QILALIPT

Sequence ? help Back to Top

Protein Sequence Length: 1158 aa Download sequence

MATRKYRSIN NKQFGKLNEE SPDIDGGSGG NKSRQRKRKL TDMLGPQWSN EDLKRFYEAF  60
RKYDKDWKKV AGAVRNRSAE MVEALYHMNR AYLSLPVEKA SVAGLTAMMT DHYSMLHGSE  120
SDRESDDAPG VSQKPAKRAR AKYQVNGSKG TDANVPDFLK LPPVSSNNGC FSVKKRRTIG  180
GRHAVGKRTP RYPVSHTSDK HESEKFVTPN KRGLKSDLDE HDEEVSHGEV LTLAEALQRA  240
ASPQVSDTPK RRSEHLRPPS SRKSERRKQF DWEKSSTKHR VITDENYLED SLGSGETENG  300
DFYRNSSYMM DARGVGTVGV QKKANKSLGR KPNRDEDWEA CSGTNEGLNL SYVKEQPENE  360
VTDSRYGRPR KKNKHLKEDV KQALDGLTLL ANMSLKIGQA SADGSESSVQ FKEERGRGSR  420
GHLDNFSRHE TFSTNRQRDK SNFSGVKEKS LREVETTIKM QKLKRKHLAS KMQSPTNESN  480
TDLLPDEREQ TEALEEYVKR STMKAKRVGP AAVVPKQGNS FKPPELTSSN ADPVRPGTDA  540
ALSTEKVPTP SQVFLPTKYT SRRKMNLQKA LIHRVSNFFE DLGNKRPGKH TSQDGTLDIK  600
EKLCRCLSSP MLRRWCAFEW FYNAIDYPWF AKKEFVEYLN HVRLGHVPRL TRAEWGVIRS  660
SLGKPRRLSQ QFLREEKEKL EQYRESVRTH YTELRNGTRD GLPTDLARPL SVGQRVIACH  720
PRTREFHDGS VLTVDRNRCR VQFDRHELGV EFVMDIDCMP LNALENMPEA LRRQNIAAGR  780
LSENLNDPKL NNQSKDKTTG GYKSIAPCAK LETTDVSSQI SSPIYPTNTL IKKAEGDTVS  840
DIAEAKAAAN EMKAAYTQPC SLAQLQAREA DTRALSELSR ALEKKEALVS ELSRMNDEVQ  900
ENQIYGENSL KDYDPFKKQY AKVLIQLKDG NDQVSSDLIY LRKRNTYQGD SPPWQTSKPG  960
SGVPVGPFNS IDASGFLPQE AASHVVGILE SSRVKAQTMV DVAVQELLSC KDGEDAFGSI  1020
GEALDSASTH KNGTEVRSFT STDPINGGSF HYQDAATNSH ISKPVTAVYS NGITQNNSTF  1080
DANEVQIPKD LISSCLATLL MVQTCTEERQ YPPAEVAQIL DSAFTSLHPC CSQNLPIYQD  1140
IRLCMGLVKN QILALIPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein