PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026405607.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 682aa    MW: 77455.3 Da    PI: 5.8995
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026405607.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS388.86.1e-1193106802374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     ++lL++ A+av++gd + a++lL++l++++sp+gd  qR+a+yf+ +L+arla+s+s++y++lp ++ s    s+ l+a++lf  ++P+lk+s++
  XP_026405607.1 310 QTLLIHSAQAVAAGDSRTASELLKQLRQHSSPYGDGSQRVAHYFADGLEARLAGSGSQIYSTLPRKPPS---ASDLLKAYQLFMVTFPFLKISYF 401
                     689***************************************************************999...9********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                      aNq+I   +e+++++HiiDf+i +G+QWp+L+q L++R++gpp+lRiTg+g pe+g   +e++eetg+rL+++A+el+vpfe++  +a+++e++
  XP_026405607.1 402 FANQTIGSLAENATTLHIIDFGIIYGFQWPCLIQRLSKRKGGPPKLRITGIGLPEPGfrPAERVEETGRRLRDYARELNVPFEYHG-IAQKWETI 495
                     ********************************************************9*****************************.7******* PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     +le+L+++++E l+ n++++ ++lldesv l+s+rd+vL+l+++++P+v+v +  +  +ns+ F+ rf +al ++s+lfd l++ +pre+ eri 
  XP_026405607.1 496 QLEDLKINKDELLVANCMYHGKNLLDESVILDSPRDAVLELIRKMNPNVFVQAILNGTYNSPFFVSRFRDALFHFSSLFDVLDTIVPRENPERII 590
                     *********************************************************************************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +Er ++++e+ n++aceg+er+er et+++W++r ++aGF ++pl+++++k+ak      + + + v+e+s +l+lgWk++ L+++S+Wr
  XP_026405607.1 591 IERDFFSKEAFNIIACEGSERIERPETYKQWQSRNMKAGFMQLPLNTDIMKKAKKQAISDYHKDFVVDEDSRWLLLGWKGKILFAISSWR 680
                     *****************************************************87665555466*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 682 aa     Download sequence    
MDQNHHTFSS SSSSNSGSSD TSSSSNVSQE EEFDFSDVVL NYINQMLMEE NNDEKNLIFQ  60
EDYLALQSAE KPFYEILGQK YPTDCNPEVQ IDNFTHYNSS KKAVETNWID ELGVYESLFD  120
IGSVPSDYTF QTASGSQLTY NPSIVEGLVE SGVGKVQVPD VHSESEPIWQ FRKGVEANKF  180
LSDDNNLIIN EEHNGFIYVQ RKKEACEAAD VVVPLDKDAQ QISPYRSRGK KNVHRDDIDL  240
EGKSNKQLAA VQTAMFDMVL ISDDEKGKKA DSILRESLKI ETRKNLHQNG GRRSHGKKQT  300
GKKDLVVDLQ TLLIHSAQAV AAGDSRTASE LLKQLRQHSS PYGDGSQRVA HYFADGLEAR  360
LAGSGSQIYS TLPRKPPSAS DLLKAYQLFM VTFPFLKISY FFANQTIGSL AENATTLHII  420
DFGIIYGFQW PCLIQRLSKR KGGPPKLRIT GIGLPEPGFR PAERVEETGR RLRDYARELN  480
VPFEYHGIAQ KWETIQLEDL KINKDELLVA NCMYHGKNLL DESVILDSPR DAVLELIRKM  540
NPNVFVQAIL NGTYNSPFFV SRFRDALFHF SSLFDVLDTI VPRENPERII IERDFFSKEA  600
FNIIACEGSE RIERPETYKQ WQSRNMKAGF MQLPLNTDIM KKAKKQAISD YHKDFVVDED  660
SRWLLLGWKG KILFAISSWR PM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein