PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026405658.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

TCP

Protein Properties

Length: 505aa MW: 55218.4 Da PI: 8.1077

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026405658.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	122.9	3.7e-38	99	259	2	133
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt............................... 65 g+kdrhsk+ T++g+RdRRvRls+++a++f+dLqd+LG+d++sk++eWL+++a ai el+++ XP_026405658.1 99 SGGKDRHSKVLTAKGLRDRRVRLSVSTAIQFYDLQDRLGYDQPSKAVEWLIKAAADAITELPSLnatfpdvpkqllcddkrthhnvnleprldia 193 689***********************************************************9999999999999998777777666654433 PP TCP 66 ..ssssasec.eaesssssasnsssgkaaksaakskksqksaasalnlak.esrakarararertrekmrik 133 + + ++++ ++ +++++++ + +++a+s+ s++s+ s+l+l++ e r kar+rarert++++ ++ XP_026405658.1 194 emE------FdTDSAYNQHHQQQQHNLSLSKSACSSTSETSKGSVLSLSRsEIRVKARERARERTAKDKEKE 259 331......22222233333333444677788899999999999**99**********99988766 PP

Sequence ? help Back to Top
Protein Sequence Length: 505 aa Download sequence
MEVDDIQSHH QPCKLSRISN SRNDSNKIGR KGSAADQYQQ QQQDAEDEEP ADQRKVININ 60 SAMINTTGGA VGGFDIGSND NGRLRAWQSS RIFRVSRASG GKDRHSKVLT AKGLRDRRVR 120 LSVSTAIQFY DLQDRLGYDQ PSKAVEWLIK AAADAITELP SLNATFPDVP KQLLCDDKRT 180 HHNVNLEPRL DIAEMEFDTD SAYNQHHQQQ QHNLSLSKSA CSSTSETSKG SVLSLSRSEI 240 RVKARERARE RTAKDKEKEK PDEAPHHTSS TGRRQQNAQS SSFTELLTGA QHNNSSSLSA 300 AQQNLGFSNF VISKQHRPLA PTQMDYFSGG LFGGGTLRNN NHYSSSGFST QNDYGNASQA 360 TPHTMGVPPP PFTVTADHHQ QQHPEMHQFS FLSDHLIPDT AAATAANGNE YNLNFTISSG 420 IAGFNRGTLQ SNSSQSQLPH HLQPRFSSSP SDGPNMPFFM GNVGNAASSL TPAGNQFPSG 480 FDGRLQLCYG DGGGSHSEMK GKGKN

Sequence ? help Back to Top

Protein Sequence Length: 505 aa Download sequence

MEVDDIQSHH QPCKLSRISN SRNDSNKIGR KGSAADQYQQ QQQDAEDEEP ADQRKVININ  60
SAMINTTGGA VGGFDIGSND NGRLRAWQSS RIFRVSRASG GKDRHSKVLT AKGLRDRRVR  120
LSVSTAIQFY DLQDRLGYDQ PSKAVEWLIK AAADAITELP SLNATFPDVP KQLLCDDKRT  180
HHNVNLEPRL DIAEMEFDTD SAYNQHHQQQ QHNLSLSKSA CSSTSETSKG SVLSLSRSEI  240
RVKARERARE RTAKDKEKEK PDEAPHHTSS TGRRQQNAQS SSFTELLTGA QHNNSSSLSA  300
AQQNLGFSNF VISKQHRPLA PTQMDYFSGG LFGGGTLRNN NHYSSSGFST QNDYGNASQA  360
TPHTMGVPPP PFTVTADHHQ QQHPEMHQFS FLSDHLIPDT AAATAANGNE YNLNFTISSG  420
IAGFNRGTLQ SNSSQSQLPH HLQPRFSSSP SDGPNMPFFM GNVGNAASSL TPAGNQFPSG  480
FDGRLQLCYG DGGGSHSEMK GKGKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18390.1	6e-42	TCP family protein