PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026405716.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 242aa    MW: 27531 Da    PI: 4.6105
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026405716.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF70.31.8e-222165145
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                    ++i++ks+ qvtfskRr+g++KKA ELSvL++a+va+i fs+ gk
  XP_026405716.1 21 EKIKDKSRLQVTFSKRRKGLFKKATELSVLTGAQVALIAFSPAGK 65
                    579****************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MMIEMKKQKK GGDGRKRIKI EKIKDKSRLQ VTFSKRRKGL FKKATELSVL TGAQVALIAF  60
SPAGKPYVCG NRGLLLDRFV NGEASEIHQK DHDDPEQGRY MEVEKELEAE KKRGVFMESL  120
INCDLGVCND KSWWDTYVDG LSLDELKQMK SDMEQLQKCV AQRSNDLKMN SNTASSSSSY  180
EDKSLALMEL PAGNDEIVDN DYLNEEMVND LVFGFDSQEY DFGTTTSTDQ EITADMFSDE  240
YY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.11e-21M-type_MADS family protein