PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026405985.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 419aa MW: 47336.3 Da PI: 9.7107

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026405985.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.8	9e-17	129	174	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v q+G+ +W++I+++++ gR++k+c++rw++ XP_026405985.1 129 RGHWRPAEDSKLKELVSQYGPQNWNLISEKLQ-GRSGKSCRLRWFNQ 174 899***************************.*********996 PP
2	Myb_DNA-binding	52.2	1.4e-16	181	224	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++++eE+e+l+ a++++G++ W+ I+r ++ gRt++ +k++w+ XP_026405985.1 181 RRAFSEEEEERLLAAHRLYGNR-WAMISRLFP-GRTDNGVKNHWHV 224 678*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MTLQRPQQNL QKSSGGDESS YFRRRFQEIN FLSSRPSSPT SLSLSFGPFS SSSKDRSTMS 60 KSSDLSFQVM GGSNDEQNIK SWSFQTTSEE TAIKNEMPCN ADYQKQQESE SFGHGSNQQS 120 TSSVHSIARG HWRPAEDSKL KELVSQYGPQ NWNLISEKLQ GRSGKSCRLR WFNQLDPRIN 180 RRAFSEEEEE RLLAAHRLYG NRWAMISRLF PGRTDNGVKN HWHVIMARKQ REQSNNLSRR 240 SSRKPFLPIP TASTTTTYDH QTLLMMKHED LKLISSYHQK NAAAGGARSE STITTKDDQS 300 TSTCTNLSLN SSSAARTQPI SPNQMHFDFR MGPFEENMMS FSNRCLYSEK TKTGINKHDN 360 YSMKMVIGLD HHPSGGYSDS NSEISANDSS VHKRGRHNLN TGDNEALPFI DFLGVGTTA

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MTLQRPQQNL QKSSGGDESS YFRRRFQEIN FLSSRPSSPT SLSLSFGPFS SSSKDRSTMS  60
KSSDLSFQVM GGSNDEQNIK SWSFQTTSEE TAIKNEMPCN ADYQKQQESE SFGHGSNQQS  120
TSSVHSIARG HWRPAEDSKL KELVSQYGPQ NWNLISEKLQ GRSGKSCRLR WFNQLDPRIN  180
RRAFSEEEEE RLLAAHRLYG NRWAMISRLF PGRTDNGVKN HWHVIMARKQ REQSNNLSRR  240
SSRKPFLPIP TASTTTTYDH QTLLMMKHED LKLISSYHQK NAAAGGARSE STITTKDDQS  300
TSTCTNLSLN SSSAARTQPI SPNQMHFDFR MGPFEENMMS FSNRCLYSEK TKTGINKHDN  360
YSMKMVIGLD HHPSGGYSDS NSEISANDSS VHKRGRHNLN TGDNEALPFI DFLGVGTTA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	2e-67	MYB family protein