PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026406184.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 104aa    MW: 11708.5 Da    PI: 10.358
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026406184.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF688.7e-221564150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    kri n+  rqvt skR+ gi+KKA+EL +LC+a vavii s+ g+ y y+
  XP_026406184.1 15 KRIRNENTRQVTVSKRKGGIFKKAHELGTLCGAHVAVIIDSPAGQPYSYI 64
                    79*******************************************99997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    
MARKPSMGKQ KIEIKRIRNE NTRQVTVSKR KGGIFKKAHE LGTLCGAHVA VIIDSPAGQP  60
YSYINSETVM DRYLSGDTRT PTPPVMPHRE ARILELNKEY SEAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.11e-21M-type_MADS family protein