PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026406233.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 471aa MW: 53723.3 Da PI: 7.4976

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026406233.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	98.5	4.1e-31	109	213	1	99
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.se 89 f+kv tpsdv+k++rlv+pk++ae++ + +e++ l +ed+sg+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++ + + XP_026406233.1 109 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldSAANEKGLLLNFEDRSGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFERGaAEsYK 203 89*************************955556889***********************************************65333355 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 ++++ ++r+ XP_026406233.1 204 DRFYIDWRRR 213 5566666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MEFVKESRDG LYSDHPQEDQ EEEVVMADNN STTTKQLFSS SSSSSFSSLS PSSSSSQYKN 60 VVVHHHHQQQ QQQQQQQQIH QLPANFLSGM SNSSAIEVIG EFIEKEHMFD KVVTPSDVGK 120 LNRLVIPKQH AEKYFPLDSA ANEKGLLLNF EDRSGKPWRF RYSYWNSSQS YVMTKGWSRF 180 VKEKKLDAGD IVSFERGAAE SYKDRFYIDW RRRPQAPDLS LHHHHHHHSN PLSFPRTVIP 240 WGTTHARLFS PQNLAVSSST RDHLQLNYDH HHHQQQQQHY HYHQQQLQQR LSSSTSSTSY 300 GNYSNTNMVN NNQRPGSVVY SRSSSSPITT RIPDHQAHHQ QQQVGLMQQY TSGDNHNNMA 360 MVFDSVPVVH GQAAAKRVRL FGVNLECPIS EDDNECDILS STTIPMNTTI GGSSIHTHHP 420 HHQILNNPSQ PIHSAPPPHL QLRVYNGAPL PTMPTEFPKR GRPSLSFDLD I

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MEFVKESRDG LYSDHPQEDQ EEEVVMADNN STTTKQLFSS SSSSSFSSLS PSSSSSQYKN  60
VVVHHHHQQQ QQQQQQQQIH QLPANFLSGM SNSSAIEVIG EFIEKEHMFD KVVTPSDVGK  120
LNRLVIPKQH AEKYFPLDSA ANEKGLLLNF EDRSGKPWRF RYSYWNSSQS YVMTKGWSRF  180
VKEKKLDAGD IVSFERGAAE SYKDRFYIDW RRRPQAPDLS LHHHHHHHSN PLSFPRTVIP  240
WGTTHARLFS PQNLAVSSST RDHLQLNYDH HHHQQQQQHY HYHQQQLQQR LSSSTSSTSY  300
GNYSNTNMVN NNQRPGSVVY SRSSSSPITT RIPDHQAHHQ QQQVGLMQQY TSGDNHNNMA  360
MVFDSVPVVH GQAAAKRVRL FGVNLECPIS EDDNECDILS STTIPMNTTI GGSSIHTHHP  420
HHQILNNPSQ PIHSAPPPHL QLRVYNGAPL PTMPTEFPKR GRPSLSFDLD I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46870.1	2e-64	B3 family protein