PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026406273.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 230aa    MW: 25638 Da    PI: 9.2455
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026406273.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF71.76.3e-23957149
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                    krie +  rqvtfskRr g++KKA+EL++LC+ae+a+i+fs+ gk + +
  XP_026406273.1  9 KRIEKEDARQVTFSKRRGGLIKKAHELCTLCGAEIAIIVFSPAGKPFSF 57
                    79******************************************97666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MGRQKIEIKR IEKEDARQVT FSKRRGGLIK KAHELCTLCG AEIAIIVFSP AGKPFSFIHP  60
ESVIDRYLSG YSLQENMTPT PLVSAHRDAK IRELNKEYTE ALNKLEAEKK RGASLKKMKK  120
ASRKQFWWDP IDDLGVHELE QLSGAIDELK NQVAERADEL LLGSSSSMSF LPGNNSSNGM  180
SSTSHSEYSS TTTTYETKPA IPNHQILTSS LPHHGSYGTG FGFYGRNGLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.13e-42M-type_MADS family protein