PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026406337.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family CO-like
Protein Properties Length: 403aa    MW: 44397.9 Da    PI: 5.4459
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026406337.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box201.4e-06444539
        zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39
                     C+ ++e++ + +C+++  +lC +C  + H+       H++
  XP_026406337.1  4 LCDFCGEQRSIVYCRSDAACLCLSCDRNVHSAnalskrHSR 44
                    7*****************************65667777765 PP
2zf-B_box24.46e-084690442
        zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42
                     +C+++++++++  C + ++ lC++C  ++H g      H+++p+
  XP_026406337.1 46 LVCERCNSHPASVRCIEENTSLCQNCDWNGHGGsnsssgHKRQPI 90
                    68*****************************65899999*99986 PP
3CCT63.56.5e-22346389144
             CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 
                     R+ a+lRYkeK+k RkF+KkirYesRKa+A+ R RvKGrFvk+ 
  XP_026406337.1 346 RNSAVLRYKEKKKARKFDKKIRYESRKARADVRRRVKGRFVKAG 389
                     999**************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    
MGHLCDFCGE QRSIVYCRSD AACLCLSCDR NVHSANALSK RHSRTLVCER CNSHPASVRC  60
IEENTSLCQN CDWNGHGGSN SSSGHKRQPI NCYSGCPSAS ELSRIWSFVL DFPSMGDPNC  120
EQGMGLMSID ENTVSNSWGP NETNNNADAA DTTGNNDAEN LEKLNMWMES SSMPEGNQGG  180
GDQQDSTTPK HSPKDLEFNE SDLYEDFNAA DVDLNIENYD QLFGMSQSHS EHLFENGGMD  240
SLFGMKDMSA ADSNRQGFSG GKSKTKQQPA CSALSADCIM TTKTEPIISS YPERQANSCH  300
SLSFSGLTGE SSAGDYQDCG VSPMLSMGEP PWFPPGTENT FTTAGRNSAV LRYKEKKKAR  360
KFDKKIRYES RKARADVRRR VKGRFVKAGE AYDYDPLCHT RSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48250.11e-109CO-like family protein