PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026406714.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Trihelix

Protein Properties

Length: 497aa MW: 56859.7 Da PI: 5.0785

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026406714.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	25.9	2.6e-08	106	142	1	36
trihelix 1 rWtkqevlaLiearremeerlr.rgklkkplWeevsk 36 rW+++e laL+++r+em++++r +++ k+plWe vs+ XP_026406714.1 106 RWPQSEALALLKIRSEMDSQFRvSSNPKGPLWEIVSR 142 8*******************44789*****997 PP
2	trihelix	90.3	2.1e-28	347	431	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW+k+ev+aLi +r+ me+++r+g++k p Wee+s m + gf++++k+Ckekwen+nk++k+ + + kkr se+ +tcpyf +l+ XP_026406714.1 347 RWPKHEVQALISLRTAMEHKFRTGAAKIPMWEEISLGMTSMGFTKTAKKCKEKWENINKYFKRAASSGKKR-SENAKTCPYFYELD 431 8******************************************************************98.77888***9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 497 aa Download sequence
MSLTDLSEEI SPFSVTGNNL LDNYQQTPSS SEIEFRSDLP LQKLRPVRNN QFVTEFTNGS 60 ANFDSISPDV KNEEWFCSPV NDLPRKDDGG GGVGVDAGGG DSENLRWPQS EALALLKIRS 120 EMDSQFRVSS NPKGPLWEIV SRLQDTIQKT TQEPNVSRME EEVGVKTTHS GSADTVLHEF 180 GSDAGNENVD DEFGESLSRK RKREIRNELK DHFEDLVSKM MKKQEDMYKV LLETIEQKEK 240 DRITREETRR NLERERMRKE EERRAQDTQR SLALLSFLGK FFGQPEINTP EPLRQQEINT 300 PQSTGQQIIN IPQSPELCRE IVLHDQSHQK KQKVEGSEYM LDANFKRWPK HEVQALISLR 360 TAMEHKFRTG AAKIPMWEEI SLGMTSMGFT KTAKKCKEKW ENINKYFKRA ASSGKKRSEN 420 AKTCPYFYEL DMLYKKRLIN PEKASEAVKE EPQEKEPQEN NSNGEMLTTL AQVCDLFSMS 480 EPLLEPAVGE SGSMDLS

Sequence ? help Back to Top

Protein Sequence Length: 497 aa Download sequence

MSLTDLSEEI SPFSVTGNNL LDNYQQTPSS SEIEFRSDLP LQKLRPVRNN QFVTEFTNGS  60
ANFDSISPDV KNEEWFCSPV NDLPRKDDGG GGVGVDAGGG DSENLRWPQS EALALLKIRS  120
EMDSQFRVSS NPKGPLWEIV SRLQDTIQKT TQEPNVSRME EEVGVKTTHS GSADTVLHEF  180
GSDAGNENVD DEFGESLSRK RKREIRNELK DHFEDLVSKM MKKQEDMYKV LLETIEQKEK  240
DRITREETRR NLERERMRKE EERRAQDTQR SLALLSFLGK FFGQPEINTP EPLRQQEINT  300
PQSTGQQIIN IPQSPELCRE IVLHDQSHQK KQKVEGSEYM LDANFKRWPK HEVQALISLR  360
TAMEHKFRTG AAKIPMWEEI SLGMTSMGFT KTAKKCKEKW ENINKYFKRA ASSGKKRSEN  420
AKTCPYFYEL DMLYKKRLIN PEKASEAVKE EPQEKEPQEN NSNGEMLTTL AQVCDLFSMS  480
EPLLEPAVGE SGSMDLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47660.1	7e-34	Trihelix family protein