PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026407006.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 225aa MW: 26331.6 Da PI: 8.1345

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026407006.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56	9.4e-18	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll ++v ++G g+W+ +a++ g++R++k+c++rw +yl XP_026407006.1 16 KGPWTAEEDRLLNEYVSMHGEGRWSCVAKCAGLNRSGKSCRLRWVNYL 63 79********************************************97 PP
2	Myb_DNA-binding	46.6	7.9e-15	69	113	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g T++E+ ++ +++ ++G++ W+ Iar+++ gRt++++k++w+++ XP_026407006.1 69 KGQLTPQEQSIITELHSLWGNK-WSMIARCLP-GRTDNEIKNYWRTH 113 5778****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MAGVDGWGMT DKGLRKGPWT AEEDRLLNEY VSMHGEGRWS CVAKCAGLNR SGKSCRLRWV 60 NYLKPGLKKG QLTPQEQSII TELHSLWGNK WSMIARCLPG RTDNEIKNYW RTHFKITKPN 120 RRRQDKPRTS ALRRQQFRRQ QQQQQQDQQE AKQKQVEETV TSAQVDNKQA MELLMCTNLE 180 DEQCRPVMFQ DDHENIRPSD FIDDVEEGAY WGGLWNMDDV HIDHA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30210.1	5e-69	MYB family protein