PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026407196.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HD-ZIP

Protein Properties

Length: 332aa MW: 36930.3 Da PI: 8.011

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026407196.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.7	2e-18	162	216	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++k+q +Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k XP_026407196.1 162 RKKLRLSKDQSAILEETFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 216 788899***********************************************98 PP
2	HD-ZIP_I/II	126.8	9.5e-41	162	251	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rlsk+q+++LEe+F+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +l XP_026407196.1 162 RKKLRLSKDQSAILEETFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELR-AL 251 69*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MFVEKEDLGL SLSLCSSTTA ENRYPLQLNL MPPASVSNNP SPFLIHHQKT NSITNWNEAF 60 GSSDRITAEM YRGETRSFLR GIDVNRMPST TATIDCEEEV GVSSPNSTVS SISGNKRRSI 120 ERDTINCSGG DGEDNEIERA SSRSGGNGGG MNSDDEDGEN SRKKLRLSKD QSAILEETFK 180 EHNTLNPKQK LALAKQLNLR PRQVEVWFQN RRARTKLKQT EVDCEFLKRC CENLTEENRR 240 LQKEVQELRA LKLSPQFYMQ MTPPTTLTMC PSCERVAVSA STNASAAGST PPVPAPSVAA 300 EAAHHRHHQQ MSAQQRALPT NPWAQTPVVS RR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	161	167	SRKKLRL
2	211	219	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44910.1	7e-69	HD-ZIP family protein