PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026407360.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 522aa    MW: 58011.3 Da    PI: 6.0061
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026407360.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS445.53.6e-1361525221374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l+++L+ cA+a+s++++  +++l+a+l++++s  gdp+qRl ay++e+L a+la+s+s++ykal+++e +   s+e l+ ++ ++e++P++kf++
  XP_026407360.1 152 LKQVLVGCANAISENNMPTTEWLIAELRQMVSVCGDPVQRLGAYMLEGLVAKLASSGSSIYKALRCKEPA---SAELLSHMHSLYEACPYFKFGY 243
                     5799*****************************************************************9...9999999999************ PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + aN aI +a++ e+r+HiiDf+isqG+QW++L++aLasR++gpp++RiTg++++ s   ++  l+ +g+rL++fA++++vpf+f++  a   ++
  XP_026407360.1 244 MSANGAIADALKDENRIHIIDFQISQGTQWLSLIKALASRTGGPPHIRITGIDDSVSAyaRNGGLQLVGHRLSHFAKSCNVPFDFHA-GAMFGSN 337
                     ******************************************************88889999*************************.899999* PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                      ele+L ++pgEalaVn+ l+lh+++desvs++++rd++L+lvkslsPkvv++veqea++n+++F++rf+e+l+yy+a+f+s+++klpre++eri
  XP_026407360.1 338 AELENLTLRPGEALAVNFPLMLHHTPDESVSTHNHRDRLLRLVKSLSPKVVTLVEQEANTNTAPFVQRFIETLNYYTAIFESIDVKLPREDKERI 432
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +vE+++l+r++vn++aceg er+erhe l+kW++r+++aGF+p+pls   ++++k++l++++++ y++ee++g+l+lgWk+++Lv+ +aW+
  XP_026407360.1 433 NVEQHCLARDVVNIIACEGVERVERHELLGKWKSRFMMAGFTPYPLSPVFNATIKAVLENYNEK-YTLEEKDGALYLGWKNKALVASCAWQ 522
                     **************************************************************66.*************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 522 aa     Download sequence    
MSSSMNHKNL DASNGFYCKP MQCYPQDSEG FDQHPSFNDS TQINSLPVQS SPSTISFSPN  60
GSPVSQLDSQ SNPSESRHSP DNAYGSHISV SSVTDDVDDL RNTLREWESM MLEPDSDMAD  120
SYGSTIHGDK NQASVEHQKL KEMTEAIRRG DLKQVLVGCA NAISENNMPT TEWLIAELRQ  180
MVSVCGDPVQ RLGAYMLEGL VAKLASSGSS IYKALRCKEP ASAELLSHMH SLYEACPYFK  240
FGYMSANGAI ADALKDENRI HIIDFQISQG TQWLSLIKAL ASRTGGPPHI RITGIDDSVS  300
AYARNGGLQL VGHRLSHFAK SCNVPFDFHA GAMFGSNAEL ENLTLRPGEA LAVNFPLMLH  360
HTPDESVSTH NHRDRLLRLV KSLSPKVVTL VEQEANTNTA PFVQRFIETL NYYTAIFESI  420
DVKLPREDKE RINVEQHCLA RDVVNIIACE GVERVERHEL LGKWKSRFMM AGFTPYPLSP  480
VFNATIKAVL ENYNEKYTLE EKDGALYLGW KNKALVASCA WQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50600.10.0GRAS family protein